RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 NKX1-2Q9UD57 310 aaPredicted RBP14.19□□□□□ -0.14
COL20A1-206ENST00000479501 PRKAG3Q9UGI9 489 aa14.19□□□□□ -0.14
COL20A1-206ENST00000479501 FADS3Q9Y5Q0 445 aa14.19□□□□□ -0.14
COL20A1-206ENST00000479501 CENPXA8MT69 81 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 TMEM233B4DJY2 109 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 H3BNX3 289 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 NADKO95544 446 aaPredicted RBP14.18□□□□□ -0.14
COL20A1-206ENST00000479501 RXRGP48443 463 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 PLCL1Q15111 1095 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 PPP4R4Q6NUP7 873 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 RD3Q7Z3Z2 195 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 ZNF605Q86T29 641 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 SATL1Q86VE3 508 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 ARL10Q8N8L6 244 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 SKA1Q96BD8 255 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 ROPN1LQ96C74 230 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 ITCHQ96J02 903 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 APOLD1Q96LR9 279 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 CYP2S1Q96SQ9 504 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 TMEM248Q9NWD8 314 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 RPS6KA6Q9UK32 745 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 YIPF1Q9Y548 306 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 KCTD3Q9Y597 815 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 SQORQ9Y6N5 450 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 MYO18AQ92614 2054 aaKnown RBP14.18□□□□□ -0.14
COL20A1-206ENST00000479501 NIPSNAP2O75323 286 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 POP4O95707 220 aaKnown RBP14.18□□□□□ -0.14
COL20A1-206ENST00000479501 CHRNA1P02708 482 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 CCT3P49368 545 aaKnown RBP14.18□□□□□ -0.14
COL20A1-206ENST00000479501 ALFQ53S48 1182 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 INTS11Q5TA45 600 aaKnown RBP14.18□□□□□ -0.14
COL20A1-206ENST00000479501 RALGPS2Q86X27 583 aaPredicted RBP14.18□□□□□ -0.14
COL20A1-206ENST00000479501 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 RAB26Q9ULW5 256 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 TUBGCP6Q96RT7 1819 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 C1QTNF3-AMACRE9PGA6 284 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 CCL16O15467 120 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 TLL1O43897 1013 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 DNAJB1P25685 340 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 PRMT2P55345 433 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 LIPEQ05469 1076 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 SERINC3Q13530 473 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 IRF5Q13568 498 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 CNPY1Q3B7I2 92 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 MARCH8Q5T0T0 291 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 ZCCHC8Q6NZY4 707 aaKnown RBP14.18□□□□□ -0.14
COL20A1-206ENST00000479501 EPGNQ6UW88 154 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 MTSS1LQ765P7 747 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 TRIM74Q86UV6 250 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 TRIM73Q86UV7 250 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 ACDQ96AP0 544 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 C1orf74Q96LT6 269 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 R3HDMLQ9H3Y0 253 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 EBF3Q9H4W6 596 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 MKS1Q9NXB0 559 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 DNAJB4Q9UDY4 337 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 MYADML2A6NDP7 307 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 S100A1P23297 94 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 GTF2H2Q13888 395 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 UBXN11Q5T124 520 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 GTF2H2CQ6P1K8 395 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 TCAIMQ8N3R3 496 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 NELL1Q92832 810 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 COX4I2Q96KJ9 171 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 NUSAP1Q9BXS6 441 aaKnown RBP14.18□□□□□ -0.14
COL20A1-206ENST00000479501 CAPN10Q9HC96 672 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 DNAJC11Q9NVH1 559 aa14.18□□□□□ -0.14
COL20A1-206ENST00000479501 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL20A1-206ENST00000479501 MATN2O00339 956 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 CDK14O94921 469 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 ITGAXP20702 1163 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 TLE2Q04725 743 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 TAB1Q15750 504 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 FGD2Q7Z6J4 655 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 KRT78Q8N1N4 520 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 DPF3Q92784 378 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 QRFPRQ96P65 431 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 C1orf21Q9H246 121 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 FAM220BPB1ANY3 271 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 ALDH1A2O94788 518 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 CLDN9O95484 217 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 C8AP07357 584 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 HAPLN1P10915 354 aaPredicted RBP14.17□□□□□ -0.14
COL20A1-206ENST00000479501 CCR3P51677 355 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 HERC3Q15034 1050 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 ZNF697Q5TEC3 545 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 MFSD4BQ5TF39 518 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 PIM3Q86V86 326 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 RAVER1Q8IY67 606 aaKnown RBP14.17□□□□□ -0.14
COL20A1-206ENST00000479501 BBS4Q96RK4 519 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 YIPF2Q9BWQ6 316 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 ATG10Q9H0Y0 220 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 IGFLR1Q9H665 355 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 FANCEQ9HB96 536 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 IL12AP29459 219 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 RFX3P48380 749 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 ARL4DP49703 201 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 INO80DQ53TQ3 878 aaPredicted RBP14.17□□□□□ -0.14
COL20A1-206ENST00000479501 TREML1Q86YW5 311 aa14.17□□□□□ -0.14
COL20A1-206ENST00000479501 CILP2Q8IUL8 1156 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms