RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SLC25A41Q8N5S1 370 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 DNAAF3Q8N9W5 541 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 ARRDC2Q8TBH0 407 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 SNF8Q96H20 258 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 OXNAD1Q96HP4 312 aaPredicted RBP14.35□□□□□ -0.11
USP11-207ENST00000478596 ZNF641Q96N77 438 aaPredicted RBP14.35□□□□□ -0.11
USP11-207ENST00000478596 TBL1YQ9BQ87 522 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 APOL2Q9BQE5 337 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 NUDT22Q9BRQ3 303 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 C1QTNF7Q9BXJ2 289 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 TDRD1Q9BXT4 1180 aaKnown RBP14.35□□□□□ -0.11
USP11-207ENST00000478596 SUV39H2Q9H5I1 410 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 ETNK1Q9HBU6 452 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 MBNL1Q9NR56 388 aaKnown RBP14.35□□□□□ -0.11
USP11-207ENST00000478596 TLK1Q9UKI8 766 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 CHKBQ9Y259 395 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 PCNX1Q96RV3 2341 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 ERI2A8K979 691 aaKnown RBP14.34□□□□□ -0.11
USP11-207ENST00000478596 RHOXF2BP0C7M4 288 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 ABL2P42684 1182 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 PTGIRP43119 386 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 SRP54P61011 504 aaKnown RBP14.34□□□□□ -0.11
USP11-207ENST00000478596 SARNPP82979 210 aaKnown RBP14.34□□□□□ -0.11
USP11-207ENST00000478596 SLC7A5Q01650 507 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 GUCY2DQ02846 1103 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 SPARCL1Q14515 664 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 NR1D2Q14995 579 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 SLC14A2Q15849 920 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 LRRC73Q5JTD7 316 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 ERAP2Q6P179 960 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 C16orf46Q6P387 395 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 BRAT1Q6PJG6 821 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 USP45Q70EL2 814 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 ZNF438Q7Z4V0 828 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 PCGF5Q86SE9 256 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 TP53I13Q8NBR0 393 aaPredicted RBP14.34□□□□□ -0.11
USP11-207ENST00000478596 FAM46DQ8NEK8 389 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 RHOXF2Q9BQY4 288 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 LRRC1Q9BTT6 524 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 MLPHQ9BV36 600 aaPredicted RBP14.34□□□□□ -0.11
USP11-207ENST00000478596 RRAGDQ9NQL2 400 aaPredicted RBP14.34□□□□□ -0.11
USP11-207ENST00000478596 ITM2BQ9Y287 266 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 DGKBQ9Y6T7 804 aa14.34□□□□□ -0.11
USP11-207ENST00000478596 SHANK1Q9Y566 2161 aa14.33□□□□□ -0.11
USP11-207ENST00000478596 A0A1W2PQ67 120 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 PGLSO95336 258 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 AP2A1O95782 977 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 MMP2P08253 660 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 HTR1BP28222 390 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 CSTF2P33240 577 aaKnown RBP eCLIP14.33□□□□□ -0.127e-9■■■■■ 33.2
USP11-207ENST00000478596 PMS2P54278 862 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 POLR2LP62875 67 aaKnown RBP14.33□□□□□ -0.12
USP11-207ENST00000478596 CDK18Q07002 472 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 SEMA5AQ13591 1074 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 AMZ1Q400G9 498 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 GLE1Q53GS7 698 aaKnown RBP14.33□□□□□ -0.12
USP11-207ENST00000478596 ANKS6Q68DC2 871 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 RD3Q7Z3Z2 195 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 LINC00523Q86TU6 105 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 SFTPA2Q8IWL1 248 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 PPIL6Q8IXY8 311 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 BMPERQ8N8U9 685 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 BBOF1Q8ND07 529 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 OR4D9Q8NGE8 314 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 C5orf34Q96MH7 638 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 SLC29A3Q9BZD2 475 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 TRIT1Q9H3H1 467 aaKnown RBP14.33□□□□□ -0.12
USP11-207ENST00000478596 EIF2B3Q9NR50 452 aaKnown RBP14.33□□□□□ -0.12
USP11-207ENST00000478596 PHTF1Q9UMS5 762 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 ENTPD4Q9Y227 616 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 SLC5A6Q9Y289 635 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 SNX24Q9Y343 169 aa14.33□□□□□ -0.12
USP11-207ENST00000478596 ABCA2Q9BZC7 2435 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.32□□□□□ -0.12
USP11-207ENST00000478596 C16orf96A6NNT2 1141 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 GOLGA8MH3BSY2 632 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 DNALI1O14645 258 aaPredicted RBP14.32□□□□□ -0.12
USP11-207ENST00000478596 AREL1O15033 823 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 ZW10O43264 779 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 TM7SF2O76062 418 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 NDST3O95803 873 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 FGF1P05230 155 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 CTPS1P17812 591 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 HLA-DPA1P20036 260 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 CD1CP29017 333 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 OR1D5P58170 312 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 NFATC4Q14934 902 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 INPP5JQ15735 1006 aaPredicted RBP14.32□□□□□ -0.12
USP11-207ENST00000478596 KDELC1Q6UW63 502 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 ENPP7Q6UWV6 458 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 LRRN4CLQ8ND94 238 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 ERP44Q9BS26 406 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 OCIAD1Q9NX40 245 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 KLQ9UEF7 1012 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 ANAPC5Q9UJX4 755 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 POLHQ9Y253 713 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 TMEM184BQ9Y519 407 aaPredicted RBP14.32□□□□□ -0.12
USP11-207ENST00000478596 PCDHB3Q9Y5E6 796 aa14.32□□□□□ -0.12
USP11-207ENST00000478596 ESYT3A0FGR9 886 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 B4DGG1 531 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms