RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 MAATS1Q7Z4T9 603 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 RAB44Q7Z6P3 723 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 TRIM48Q8IWZ4 208 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 AGGF1Q8N302 714 aaeCLIP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ARL14Q8N4G2 192 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 KIF18AQ8NI77 898 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 PEX13Q92968 403 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 STAMBPL1Q96FJ0 436 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ZNF514Q96K75 400 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 TTC1Q99614 292 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 MRM3Q9HC36 420 aaKnown RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 LRIT1Q9P2V4 623 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 PSMD13Q9UNM6 376 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 MRFAP1Q9Y605 127 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 PRSS21Q9Y6M0 314 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 RPS6KL1Q9Y6S9 549 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ITPR1Q14643 2758 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 NBEAQ8NFP9 2946 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 APC2O95996 2303 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 IGLV3-16A0A075B6K0 115 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 FAM237BA0A1B0GVD1 139 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 UBA6A0AVT1 1052 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 FAM187AA6NFU0 413 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 OR52A4PA6NMU1 304 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SGTAO43765 313 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 NUDT21O43809 227 aaKnown RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 OPA1O60313 960 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 DKK1O94907 266 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 RPLP0P05388 317 aaKnown RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SLC2A4P14672 509 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 GLB1P16278 677 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ITGB6P18564 788 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 IDSP22304 550 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 PSMA3P25788 255 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ARNTP27540 789 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ALDH4A1P30038 563 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 NSG1P42857 185 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 MAGEA3P43357 314 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 MAPK9P45984 424 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 PRLHRP49683 370 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 INSM1Q01101 510 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 HHEXQ03014 270 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CALCOCO2Q13137 446 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 BRD3Q15059 726 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 HIF1AQ16665 826 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 AMZ1Q400G9 498 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ANKRD20A4Q4UJ75 823 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 BCL7AQ4VC05 210 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 AARS2Q5JTZ9 985 aaKnown RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ZNF470Q6ECI4 717 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 KIAA0930Q6ICG6 404 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 HIBCHQ6NVY1 386 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 OGFOD3Q6PK18 319 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ZNF572Q7Z3I7 529 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CCNJLQ8IV13 435 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 PDIK1LQ8N165 341 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 GALNT15Q8N3T1 639 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SFRP1Q8N474 314 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 LILRA3Q8N6C8 439 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 HEXDCQ8WVB3 486 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CFAP36Q96G28 342 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 FCRL3Q96P31 734 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 STN1Q9H668 368 aaKnown RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 VPS37BQ9H9H4 285 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SCHIP1Q9P0W5 487 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ANGPTL2Q9UKU9 493 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CHMP2BQ9UQN3 213 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 UTP11Q9Y3A2 253 aaKnown RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CFAP20Q9Y6A4 193 aaKnown RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 A6NCN8 305 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 MGAT4DA6NG13 374 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 AGRPO00253 132 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 PPM1DO15297 605 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 TUBB4AP04350 444 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 POLBP06746 335 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SLC35G4P0C7Q5 338 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 JUPP14923 745 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 BRAFP15056 766 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 PGAM1P18669 254 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 PPARGP37231 505 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 HALP42357 657 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 PREPP48147 710 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 TTPAP49638 278 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CLCNKAP51800 687 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CSE1LP55060 971 aaKnown RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 EIF3BP55884 814 aaKnown RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ARL4CP56559 192 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 OR1D5P58170 312 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CCL7P80098 99 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 E2F1Q01094 437 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SLC7A5Q01650 507 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 BOP1Q14137 746 aaKnown RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SPIDRQ14159 915 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ITIH4Q14624 930 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CRYMQ14894 314 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 MAP9Q49MG5 647 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SYTL3Q4VX76 610 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 LYPLAL1Q5VWZ2 237 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 MRNIPQ6NTE8 343 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 IYDQ6PHW0 289 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms