RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CKMT2P17540 419 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 ITGB6P18564 788 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 RGS1Q08116 209 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 PTP4A2Q12974 167 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 PEX6Q13608 980 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 POLD3Q15054 466 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 PDK2Q15119 407 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 GEN1Q17RS7 908 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 MPP7Q5T2T1 576 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 C10orf62Q5T681 223 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 MFSD14CQ5VZR4 134 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF517Q6ZMY9 492 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 GPRIN3Q6ZVF9 776 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 RAB43Q86YS6 212 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 C7orf31Q8N865 590 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 SETD6Q8TBK2 473 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF778Q96MU6 729 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 OSMRQ99650 979 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF395Q9H8N7 513 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 ACSL5Q9ULC5 683 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 CNOT6Q9ULM6 557 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 AGAP5A6NIR3 686 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 E7ESA3 106 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 FZD6O60353 706 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 AVILO75366 819 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 IGHA2P01877 340 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 CFHP08603 1231 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 RBP1P09455 135 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 CD19P15391 556 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 NUBP1P53384 320 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 BPIFB3P59826 476 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 CYP4F8P98187 520 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 PRKCDQ05655 676 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 MAMLD1Q13495 774 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 KCNC3Q14003 757 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 LGSNQ5TDP6 509 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 FAM180BQ6P0A1 224 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF782Q6ZMW2 699 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 MACC1Q6ZN28 852 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 CBR4Q8N4T8 237 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 KDM1BQ8NB78 822 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 TXNDC5Q8NBS9 432 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 FEZF2Q8TBJ5 459 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 DNAJB3Q8WWF6 145 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 CYGBQ8WWM9 190 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 ST8SIA4Q92187 359 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 SLCO4A1Q96BD0 722 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 PPWD1Q96BP3 646 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 SGTBQ96EQ0 304 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 HHIPL1Q96JK4 782 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 FOPNLQ96NB1 174 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 TSGA13Q96PP4 275 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 LENG8Q96PV6 779 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 SLIRPQ9GZT3 109 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 PACSIN3Q9UKS6 424 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 RAB23Q9ULC3 237 aa12.53□□□□□ -0.4
RTFDC1-207ENST00000477573 CCDC195A0A1B0GUA6 201 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 LINC00587B1AMM8 73 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 RGS5O15539 181 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 TOP3BO95985 862 aaKnown RBP12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 FCGR1AP12314 374 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 ENO3P13929 434 aaPredicted RBP12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF250P15622 560 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 TNNI3P19429 210 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 SSTR1P30872 391 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 HOXA11P31270 313 aaPredicted RBP12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 GZMKP49863 264 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 AIF1P55008 147 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 BEX3Q00994 111 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 ZMYND11Q15326 602 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 CDHR3Q6ZTQ4 885 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 ANKS3Q6ZW76 656 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 RHOUQ7L0Q8 258 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 OR4D10Q8NGI6 311 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 PPP1R13LQ8WUF5 828 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 LPPQ93052 612 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 PPP1R2P1Q96PQ5 205 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 GTPBP2Q9BX10 602 aaKnown RBP12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 COG4Q9H9E3 785 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 SPATA2Q9UM82 520 aa12.52□□□□□ -0.4
RTFDC1-207ENST00000477573 TFECO14948 347 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 STX7O15400 261 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 TREHO43280 583 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 PSTPIP1O43586 416 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 SLC22A5O76082 557 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 RASAL1O95294 804 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 LDOC1O95751 146 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 HPGDP15428 266 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 CRYBB1P53674 252 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 PKNOX1P55347 436 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 PURAQ00577 322 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 LGALS3BPQ08380 585 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 RTP2Q5QGT7 225 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 TAF2Q6P1X5 1199 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 DNAJC24Q6P3W2 148 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 CFAP77Q6ZQR2 320 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 PAGE2Q7Z2X7 111 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 RNF180Q86T96 592 aa12.52□□□□□ -0.41
RTFDC1-207ENST00000477573 OR7G3Q8NG95 312 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms