RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 AP2A2O94973 939 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 TNFP01375 233 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 FUCA1P04066 466 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 ABHD2P08910 425 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 ACP5P13686 325 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 EPHA8P29322 1005 aaPredicted RBP15.1■□□□□ 0.01
SEC13-215ENST00000477547 ABCG1P45844 678 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 PRLHRP49683 370 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 LIMK1P53667 647 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 HNRNPKP61978 463 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC13-215ENST00000477547 INSCQ1MX18 579 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 KBTBD12Q3ZCT8 623 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 MAP9Q49MG5 647 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 BCL7AQ4VC05 210 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 PYCR3Q53H96 274 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 TEDDM1Q5T9Z0 273 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 STPG1Q5TH74 334 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 UNQ6494/PRO21346Q6UXR6 183 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 SLC26A11Q86WA9 606 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 LRRC6Q86X45 466 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 CTAGE3PQ8IX95 158 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 CLDN19Q8N6F1 224 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 ZNF548Q8NEK5 533 aaPredicted RBP15.1■□□□□ 0.01
SEC13-215ENST00000477547 MYRIPQ8NFW9 859 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 UHMK1Q8TAS1 419 aaKnown RBP15.1■□□□□ 0.01
SEC13-215ENST00000477547 UBLCP1Q8WVY7 318 aaPredicted RBP15.1■□□□□ 0.01
SEC13-215ENST00000477547 SGF29Q96ES7 293 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 ZNF514Q96K75 400 aaPredicted RBP15.1■□□□□ 0.01
SEC13-215ENST00000477547 ACSS3Q9H6R3 686 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 IL21RQ9HBE5 538 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 NSMCE4AQ9NXX6 385 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 ZNHIT2Q9UHR6 403 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 CRYL1Q9Y2S2 319 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 GPSM3Q9Y4H4 160 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 PSAT1Q9Y617 370 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 PRSS21Q9Y6M0 314 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 FASNP49327 2511 aaKnown RBP15.09■□□□□ 0.01
SEC13-215ENST00000477547 A0A087WUV0 522 aaPredicted RBP15.09■□□□□ 0.01
SEC13-215ENST00000477547 A0A1B0GTQ1 180 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 CXorf49A8MYA2 514 aaPredicted RBP15.09■□□□□ 0.01
SEC13-215ENST00000477547 F8W8V4 182 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 QSOX1O00391 747 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 KMOO15229 486 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 SGTAO43765 313 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 DFNA5O60443 496 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 FOXD2O60548 495 aaPredicted RBP15.09■□□□□ 0.01
SEC13-215ENST00000477547 PIAS2O75928 621 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 KCNK5O95279 499 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 S1PR4O95977 384 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 C1QAP02745 245 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 CTSEP14091 401 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 RPS3P23396 243 aaKnown RBP eCLIP15.09■□□□□ 0.013e-8■■■■□ 20.4
SEC13-215ENST00000477547 CD151P48509 253 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 NAB1Q13506 487 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 PRRT3Q5FWE3 981 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 ZNF789Q5FWF6 425 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 PTRHD1Q6GMV3 140 aaKnown RBP15.09■□□□□ 0.01
SEC13-215ENST00000477547 TMEM220Q6QAJ8 160 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 CHST15Q7LFX5 561 aaPredicted RBP15.09■□□□□ 0.01
SEC13-215ENST00000477547 GALNT7Q86SF2 657 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 ZNF547Q8IVP9 402 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 BEND7Q8N7W2 519 aaPredicted RBP15.09■□□□□ 0.01
SEC13-215ENST00000477547 PPM1NQ8N819 430 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 CAVIN3Q969G5 261 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 TIMM29Q9BSF4 260 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 TMEM168Q9H0V1 697 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 P2RY12Q9H244 342 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 CCDC68Q9H2F9 335 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 TM7SF3Q9NS93 570 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 TXNDC16Q9P2K2 825 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 SPASTQ9UBP0 616 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 FAM8A1Q9UBU6 413 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 PCDHB1Q9Y5F3 818 aa15.09■□□□□ 0.01
SEC13-215ENST00000477547 ASCC3Q8N3C0 2202 aaKnown RBP15.09■□□□□ 0.01
SEC13-215ENST00000477547 CTIFO43310 598 aaKnown RBP15.08■□□□□ 0
SEC13-215ENST00000477547 FTH1P02794 183 aa15.08■□□□□ 0
SEC13-215ENST00000477547 ESR1P03372 595 aa15.08■□□□□ 0
SEC13-215ENST00000477547 CELA2BP08218 269 aaPredicted RBP15.08■□□□□ 0
SEC13-215ENST00000477547 OR56A5P0C7T3 313 aa15.08■□□□□ 0
SEC13-215ENST00000477547 LEPRP48357 1165 aaKnown RBP15.08■□□□□ 0
SEC13-215ENST00000477547 RXRGP48443 463 aa15.08■□□□□ 0
SEC13-215ENST00000477547 ILF3Q12906 894 aaKnown RBP eCLIP15.08■□□□□ 07e-7■■□□□ 12.8
SEC13-215ENST00000477547 LRP8Q14114 963 aa15.08■□□□□ 0
SEC13-215ENST00000477547 SHBQ15464 509 aa15.08■□□□□ 0
SEC13-215ENST00000477547 KLHL38Q2WGJ6 581 aa15.08■□□□□ 0
SEC13-215ENST00000477547 CTSL3PQ5NE16 218 aa15.08■□□□□ 0
SEC13-215ENST00000477547 CNSTQ6PJW8 725 aa15.08■□□□□ 0
SEC13-215ENST00000477547 CYS1Q717R9 158 aa15.08■□□□□ 0
SEC13-215ENST00000477547 STRA8Q7Z7C7 330 aa15.08■□□□□ 0
SEC13-215ENST00000477547 FSTL5Q8N475 847 aaPredicted RBP15.08■□□□□ 0
SEC13-215ENST00000477547 LKAAEAR1Q8TD35 194 aa15.08■□□□□ 0
SEC13-215ENST00000477547 LMX1AQ8TE12 382 aa15.08■□□□□ 0
SEC13-215ENST00000477547 ATXN7L3BQ96GX2 97 aa15.08■□□□□ 0
SEC13-215ENST00000477547 CYTH2Q99418 400 aa15.08■□□□□ 0
SEC13-215ENST00000477547 TSSK1BQ9BXA7 367 aa15.08■□□□□ 0
SEC13-215ENST00000477547 FUT8Q9BYC5 575 aa15.08■□□□□ 0
SEC13-215ENST00000477547 EPB41L4BQ9H329 900 aa15.08■□□□□ 0
SEC13-215ENST00000477547 TRNAU1APQ9NX07 287 aaKnown RBP15.08■□□□□ 0
SEC13-215ENST00000477547 RABGEF1Q9UJ41 708 aa15.08■□□□□ 0
SEC13-215ENST00000477547 GPR34Q9UPC5 381 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms