RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 CLDN19Q8N6F1 224 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 GPR150Q8NGU9 434 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 MAPK15Q8TD08 544 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 CCDC74AQ96AQ1 378 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 STAMBPL1Q96FJ0 436 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 EBNA1BP2Q99848 306 aaKnown RBP17.49■□□□□ 0.39
SMIM4-202ENST00000476842 CCDC3Q9BQI4 270 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 TRIM56Q9BRZ2 755 aaKnown RBP17.49■□□□□ 0.39
SMIM4-202ENST00000476842 CCM2Q9BSQ5 444 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 NAT9Q9BTE0 207 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 ABCG4Q9H172 646 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 RABGEF1Q9UJ41 708 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 UTP11Q9Y3A2 253 aaKnown RBP17.49■□□□□ 0.39
SMIM4-202ENST00000476842 PRSS21Q9Y6M0 314 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 FAM169AQ9Y6X4 670 aa17.49■□□□□ 0.39
SMIM4-202ENST00000476842 PPM1DO15297 605 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 HYAL3O43820 417 aaPredicted RBP17.48■□□□□ 0.39
SMIM4-202ENST00000476842 OR1I1O60431 355 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 POLBP06746 335 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 GSTM1P09488 218 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 PGAM1P18669 254 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 XRCC1P18887 633 aaPredicted RBP17.48■□□□□ 0.39
SMIM4-202ENST00000476842 FASLGP48023 281 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 DRG2P55039 364 aaKnown RBP17.48■□□□□ 0.39
SMIM4-202ENST00000476842 ARL4CP56559 192 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 INSM1Q01101 510 aaPredicted RBP17.48■□□□□ 0.39
SMIM4-202ENST00000476842 GSTM4Q03013 218 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 BBS9Q3SYG4 887 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 MRNIPQ6NTE8 343 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 ZNF438Q7Z4V0 828 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 LDB1Q86U70 411 aaPredicted RBP17.48■□□□□ 0.39
SMIM4-202ENST00000476842 CCNJLQ8IV13 435 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 GALNT15Q8N3T1 639 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 MMGT1Q8N4V1 131 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 WDR48Q8TAF3 677 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 SLC37A2Q8TED4 501 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 ZNF669Q96BR6 464 aaPredicted RBP17.48■□□□□ 0.39
SMIM4-202ENST00000476842 LRRC39Q96DD0 335 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 TCF12Q99081 682 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 RAB17Q9H0T7 212 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 DPH5Q9H2P9 285 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 VPS37BQ9H9H4 285 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 SCHIP1Q9P0W5 487 aaPredicted RBP17.48■□□□□ 0.39
SMIM4-202ENST00000476842 ACSL5Q9ULC5 683 aa17.48■□□□□ 0.39
SMIM4-202ENST00000476842 ZNF106Q9H2Y7 1883 aaKnown RBP17.48■□□□□ 0.39
SMIM4-202ENST00000476842 RHPN2P1A8MT19 583 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 PDZK1P1A8MUH7 402 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 F8W8V4 182 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 TTC4O95801 387 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 TOP3BO95985 862 aaKnown RBP17.47■□□□□ 0.39
SMIM4-202ENST00000476842 OR56A5P0C7T3 313 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 BRAFP15056 766 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 RPL10P27635 214 aaKnown RBP17.47■□□□□ 0.39
SMIM4-202ENST00000476842 GPR3P46089 330 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 SHC2P98077 582 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 CALCOCO2Q13137 446 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 BIRC2Q13490 618 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 NFE2L1Q14494 772 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 NR1D2Q14995 579 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 HIF1AQ16665 826 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.47■□□□□ 0.39
SMIM4-202ENST00000476842 NEPROQ6NW34 567 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 XKR5Q6UX68 686 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 FAM83HQ6ZRV2 1179 aaPredicted RBP17.47■□□□□ 0.39
SMIM4-202ENST00000476842 SLC9B2Q86UD5 537 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 IGDCC3Q8IVU1 814 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 CFAP206Q8IYR0 622 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 AVL9Q8NBF6 648 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 HM13Q8TCT9 377 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 PWWP2AQ96N64 755 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 LRRC1Q9BTT6 524 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 SARS2Q9NP81 518 aaKnown RBP17.47■□□□□ 0.39
SMIM4-202ENST00000476842 GRHL1Q9NZI5 618 aa17.47■□□□□ 0.39
SMIM4-202ENST00000476842 CTAGE15A4D2H0 777 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 GOLGA8KD6RF30 607 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 GOLGA8TH3BQL2 631 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 PRMT5O14744 637 aaPredicted RBP17.46■□□□□ 0.39
SMIM4-202ENST00000476842 PFDN6O15212 129 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 ZW10O43264 779 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 B4GAT1O43505 415 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 NDUFS3O75489 264 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 BANF1O75531 89 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 CTAGE8P0CG41 777 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 PBLDP30039 288 aaPredicted RBP17.46■□□□□ 0.39
SMIM4-202ENST00000476842 SLC19A1P41440 591 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 THOC5Q13769 683 aaKnown RBP17.46■□□□□ 0.39
SMIM4-202ENST00000476842 CLCA4Q14CN2 919 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 LONRF1Q17RB8 773 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 TYSND1Q2T9J0 566 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 ZNF658BQ4V348 819 aaPredicted RBP17.46■□□□□ 0.39
SMIM4-202ENST00000476842 CDCP2Q5VXM1 449 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 CTAGE6Q86UF2 777 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 CTAGE4Q8IX94 777 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 LMNTD2Q8IXW0 634 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 Q8N9G6 341 aaPredicted RBP17.46■□□□□ 0.39
SMIM4-202ENST00000476842 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMIM4-202ENST00000476842 SH3KBP1Q96B97 665 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 SCNM1Q9BWG6 230 aa17.46■□□□□ 0.39
SMIM4-202ENST00000476842 ZNF624Q9P2J8 865 aaPredicted RBP17.46■□□□□ 0.39
SMIM4-202ENST00000476842 CPNE7Q9UBL6 633 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms