RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 KLK3P07288 261 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-213ENST00000476777 TPM2P07951 284 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 RARAP10276 462 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 GRNP28799 593 aaKnown RBP11.12□□□□□ -0.63
BRCA1-213ENST00000476777 ARL4DP49703 201 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 VAV2P52735 878 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 DCDC1P59894 354 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 HSD11B2P80365 405 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 CDK18Q07002 472 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 GPR19Q15760 415 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 KHDC1Q4VXA5 237 aaKnown RBP11.12□□□□□ -0.63
BRCA1-213ENST00000476777 CRB2Q5IJ48 1285 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 CT47A1Q5JQC4 288 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-213ENST00000476777 VWA5B1Q5TIE3 1220 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 PRAMEF17Q5VTA0 474 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 ALS2CLQ60I27 953 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 TXNRD3NBQ6F5E7 133 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 IRF2BP2Q7Z5L9 587 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 C11orf96Q7Z7L8 435 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 DSELQ8IZU8 1212 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 TRAM1L1Q8N609 369 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 GPR26Q8NDV2 337 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 GPR150Q8NGU9 434 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 OR8K5Q8NH50 307 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 ENOX1Q8TC92 643 aaKnown RBP11.12□□□□□ -0.63
BRCA1-213ENST00000476777 ZNF501Q96CX3 271 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-213ENST00000476777 NUP85Q9BW27 656 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 CLSTN2Q9H4D0 955 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 PCDH18Q9HCL0 1135 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 KCND1Q9NSA2 647 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 AMACRQ9UHK6 382 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 ENTPD4Q9Y227 616 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 B3GNT3Q9Y2A9 372 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 TTLL3Q9Y4R7 772 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 FER1L5A0AVI2 2057 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 ARHGAP10A1A4S6 786 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 TLCD2A6NGC4 264 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 VEGFDO43915 354 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 MFSD11O43934 449 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 CDK14O94921 469 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 HLA-DQB2P05538 268 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 CAPN1P07384 714 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 MMP2P08253 660 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 CCDC172P0C7W6 258 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 FERP16591 822 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 HNRNPH3P31942 346 aaKnown RBP11.11□□□□□ -0.63
BRCA1-213ENST00000476777 RORAP35398 523 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 ZNF165P49910 485 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 RRADP55042 308 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 GSDMDP57764 484 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 GALNT2Q10471 571 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 ATP1A4Q13733 1029 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 ELOAQ14241 798 aaKnown RBP11.11□□□□□ -0.63
BRCA1-213ENST00000476777 DNTTIP2Q5QJE6 756 aaKnown RBP11.11□□□□□ -0.63
BRCA1-213ENST00000476777 PDPK2PQ6A1A2 396 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 KLHL35Q6PF15 583 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 FAM198BQ6UWH4 519 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 INPP5DQ92835 1189 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 FATE1Q969F0 183 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 CD180Q99467 661 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 UNKQ9C0B0 810 aaKnown RBP11.11□□□□□ -0.63
BRCA1-213ENST00000476777 ZFYVE1Q9HBF4 777 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 LATS2Q9NRM7 1088 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 NFKBIL1Q9UBC1 381 aaPredicted RBP11.11□□□□□ -0.63
BRCA1-213ENST00000476777 DOCK10Q96BY6 2186 aa11.11□□□□□ -0.63
BRCA1-213ENST00000476777 UBA6A0AVT1 1052 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-213ENST00000476777 LGALS16A8MUM7 142 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 F5H423 210 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-213ENST00000476777 ZBTB11O95625 1053 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-213ENST00000476777 FTLP02792 175 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-213ENST00000476777 VCLP18206 1134 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 ABRQ12979 859 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 MMRN1Q13201 1228 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 RPE65Q16518 533 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 TIGD7Q6NT04 549 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-213ENST00000476777 IGFL3Q6UXB1 125 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 TMC3Q7Z5M5 1100 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 LRRN4Q8WUT4 740 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 UBE2Q2Q8WVN8 375 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 TEKT4Q8WW24 435 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 ZNF653Q96CK0 615 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 SGSM3Q96HU1 749 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 TSGA13Q96PP4 275 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 ERGIC2Q96RQ1 377 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 TMEM63CQ9P1W3 806 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 TMPRSS11EQ9UL52 423 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 SHOC2Q9UQ13 582 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 BTRCQ9Y297 605 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 NTNG1Q9Y2I2 539 aa11.1□□□□□ -0.63
BRCA1-213ENST00000476777 COPG1Q9Y678 874 aaKnown RBP11.1□□□□□ -0.63
BRCA1-213ENST00000476777 MAP1AP78559 2803 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-213ENST00000476777 OR5K3A6NET4 321 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 LCA5LO95447 670 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 CD48P09326 243 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 GZMAP12544 262 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 CCNCP24863 283 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 CA5AP35218 305 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 CD86P42081 329 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 HALP42357 657 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 SLC25A11Q02978 314 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms