RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 USE1Q9NZ43 259 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 MOCS1Q9NZB8 636 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 FBXW11Q9UKB1 542 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 HS3ST4Q9Y661 456 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ZFP37Q9Y6Q3 630 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 F8W8V4 182 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 GRID2O43424 1007 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ATG7O95352 703 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 F9P00740 461 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CA3P07451 260 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 GSTM1P09488 218 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 HIST1H2AGP0C0S8 130 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ALPPL2P10696 532 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 G6PDP11413 515 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 AOC1P19801 751 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 HIST1H2ADP20671 130 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 WASP42768 502 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CRATP43155 626 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 MAP2K4P45985 399 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 MTTPP55157 894 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 VBP1P61758 197 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 MEF2AQ02078 507 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 PRKG2Q13237 762 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 MAPRE1Q15691 268 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CRY1Q16526 586 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SIRPB2Q5JXA9 342 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SLC39A5Q6ZMH5 540 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 STRADAQ7RTN6 431 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 RD3Q7Z3Z2 195 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CATSPER1Q8NEC5 780 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ING5Q8WYH8 240 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 GATA6Q92908 595 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 HIST1H2AHQ96KK5 128 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 OR52E6Q96RD3 313 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 HIST1H2AJQ99878 128 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 H2AFJQ9BTM1 129 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 POLR1EQ9GZS1 481 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 C11orf49Q9H6J7 331 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 IPPKQ9H8X2 491 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 PLAC1Q9HBJ0 212 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TRIM39Q9HCM9 518 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SMOXQ9NWM0 555 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 STYXL1Q9Y6J8 313 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 COMMD3-BMI1R4GMX3 469 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 DCHS1Q96JQ0 3298 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 H3BN98 237 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 PTGESO14684 152 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ARPC2O15144 300 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 PFDN6O15212 129 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ADAM12O43184 909 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 GMFGO60234 142 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SLC25A14O95258 325 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 C1RP00736 705 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CAPN3P20807 821 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 AGXTP21549 392 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CRABP2P29373 138 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CPOXP36551 454 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TGFBR1P36897 503 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 OR1E2P47887 323 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 INPP1P49441 399 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SLC26A2P50443 739 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 OR4D2P58180 307 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ALDH6A1Q02252 535 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 IKBKEQ14164 716 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CYP4V2Q6ZWL3 525 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 PIAS4Q8N2W9 510 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 KLHDC9Q8NEP7 349 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 UBASH3BQ8TF42 649 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TMEM203Q969S6 136 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 GTPBP3Q969Y2 492 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 PTERQ96BW5 349 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 NR1H4Q96RI1 486 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TCF12Q99081 682 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TSEN34Q9BSV6 310 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 OSBPL11Q9BXB4 747 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 FRMD8P1Q9BZ68 369 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CLK4Q9HAZ1 481 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ZBTB26Q9HCK0 441 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SLC38A7Q9NVC3 462 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 POU2F3Q9UKI9 436 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 UTS2RQ9UKP6 389 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TESMINQ9Y4I5 508 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SCN4AP35499 1836 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 GSAPA4D1B5 854 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CFAP99D6REC4 459 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TBX1O43435 398 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TBL1XO60907 577 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 GPR32O75388 356 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 NME6O75414 186 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SLC22A3O75751 556 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 DHRS4L1P0CG22 281 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ALOX15P16050 662 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 RECQLP46063 649 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ALDH7A1P49419 539 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 GSK3BP49841 420 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 RAP1GDS1P52306 607 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 IL2P60568 153 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SMAD3P84022 425 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CD300CQ08708 224 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 NIPAL4Q0D2K0 466 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms