RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 NELL2Q99435 816 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 TTC1Q99614 292 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 USP36Q9P275 1121 aaKnown RBP17.83■□□□□ 0.45
ATG4B-217ENST00000475693 NFKBIL1Q9UBC1 381 aaPredicted RBP17.83■□□□□ 0.45
ATG4B-217ENST00000475693 DCDC2Q9UHG0 476 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 SCML1Q9UN30 329 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 POM121BA6NF01 834 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 PLIN3O60664 434 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 PBLDP30039 288 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-217ENST00000475693 CCR7P32248 378 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 ADARP55265 1226 aaKnown RBP17.83■□□□□ 0.44
ATG4B-217ENST00000475693 CCDC15Q0P6D6 951 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 TLDC1Q6P9B6 456 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 ANKRD12Q6UB98 2062 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 TBC1D1Q86TI0 1168 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-217ENST00000475693 KBTBD6Q86V97 674 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 DDHD1Q8NEL9 900 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 CLDN23Q96B33 292 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 PTERQ96BW5 349 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 ULK4Q96C45 1275 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 GPR174Q9BXC1 333 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 CHRDQ9H2X0 955 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 SMOXQ9NWM0 555 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 ATXN10Q9UBB4 475 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 GNPTGQ9UJJ9 305 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 VPS9D1Q9Y2B5 631 aa17.83■□□□□ 0.44
ATG4B-217ENST00000475693 NEMP2A6NFY4 417 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 GLRA3O75311 464 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 VPS26AO75436 327 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 KLHL2O95198 593 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 ZWINTO95229 277 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 PROCP04070 461 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 TCEA2Q15560 299 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 PLA2G4EQ3MJ16 856 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 LYPLAL1Q5VWZ2 237 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 TMEM220Q6QAJ8 160 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 ZCCHC23Q6ZST2 131 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 ADGRG6Q86SQ4 1221 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 TSPAN17Q96FV3 270 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 VPS35Q96QK1 796 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 ALG9Q9H6U8 611 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 ZNF395Q9H8N7 513 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-217ENST00000475693 NMRAL1Q9HBL8 299 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 RAD18Q9NS91 495 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 TRMT6Q9UJA5 497 aaKnown RBP17.82■□□□□ 0.44
ATG4B-217ENST00000475693 ABCA7Q8IZY2 2146 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 SPEGQ15772 3267 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 ATG13O75143 517 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 CDK14O94921 469 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 SEMA4FO95754 770 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 TSPAN12O95859 305 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 FUCA1P04066 466 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 ZNF8P17098 575 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-217ENST00000475693 RPS3P23396 243 aaKnown RBP eCLIP17.82■□□□□ 0.44
ATG4B-217ENST00000475693 IGFALSP35858 605 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 PPARGP37231 505 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-217ENST00000475693 ACSBG2Q5FVE4 666 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 FBXO48Q5FWF7 155 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 CWF19L1Q69YN2 538 aaKnown RBP17.82■□□□□ 0.44
ATG4B-217ENST00000475693 CRTC3Q6UUV7 619 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 MACC1Q6ZN28 852 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 PIWIL4Q7Z3Z4 852 aaKnown RBP17.82■□□□□ 0.44
ATG4B-217ENST00000475693 VRK3Q8IV63 474 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 KCNJ9Q92806 393 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 EXT2Q93063 718 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 CDH19Q9H159 772 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 TM7SF3Q9NS93 570 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 XPR1Q9UBH6 696 aa17.82■□□□□ 0.44
ATG4B-217ENST00000475693 CDC7O00311 574 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 TM9SF1O15321 606 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 CD1DP15813 335 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 SERPINB4P48594 390 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 CDK3Q00526 305 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 OR4D1Q15615 310 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 LRRC8EQ6NSJ5 796 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 ZNF765Q7L2R6 523 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 PHYKPLQ8IUZ5 450 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 FOXJ1Q92949 421 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 MKS1Q9NXB0 559 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 CORO1CQ9ULV4 474 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-217ENST00000475693 PCDHB1Q9Y5F3 818 aa17.81■□□□□ 0.44
ATG4B-217ENST00000475693 LTA4HP09960 611 aaKnown RBP17.8■□□□□ 0.44
ATG4B-217ENST00000475693 DHRS4L1P0CG22 281 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 TFEBP19484 476 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 BGNP21810 368 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 SKIV2L2P42285 1042 aaKnown RBP17.8■□□□□ 0.44
ATG4B-217ENST00000475693 HSPA14Q0VDF9 509 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 BOP1Q14137 746 aaKnown RBP17.8■□□□□ 0.44
ATG4B-217ENST00000475693 KIAA1161Q6NSJ0 714 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 ISCA2Q86U28 154 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 C10orf107Q8IVU9 208 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 SPEM1Q8N4L4 309 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 N4BP2L2Q92802 583 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-217ENST00000475693 LINGO1Q96FE5 620 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 HIC2Q96JB3 615 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 PREBQ9HCU5 417 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 MRPL40Q9NQ50 206 aaKnown RBP17.8■□□□□ 0.44
ATG4B-217ENST00000475693 DHRS7Q9Y394 339 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 A0A087X1B8 175 aa17.8■□□□□ 0.44
ATG4B-217ENST00000475693 KRT87PA6NCN2 255 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms