RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SLC2A6Q9UGQ3 507 aa6.95□□□□□ -1.3
SHQ1-207ENST00000475558 CRLS1Q9UJA2 301 aa6.95□□□□□ -1.3
SHQ1-207ENST00000475558 GNPTGQ9UJJ9 305 aa6.95□□□□□ -1.3
SHQ1-207ENST00000475558 SLC39A10Q9ULF5 831 aa6.95□□□□□ -1.3
SHQ1-207ENST00000475558 PLLPQ9Y342 182 aa6.95□□□□□ -1.3
SHQ1-207ENST00000475558 FADS3Q9Y5Q0 445 aa6.95□□□□□ -1.3
SHQ1-207ENST00000475558 URB1O60287 2271 aaKnown RBP6.95□□□□□ -1.3
SHQ1-207ENST00000475558 NBEAQ8NFP9 2946 aa6.95□□□□□ -1.3
SHQ1-207ENST00000475558 APC2O95996 2303 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 HELZP42694 1942 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 FAM95CA0A1B0GW59 222 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 TCRBV21S2A2A0A5A6 115 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 TMEM120BA0PK00 339 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 ANTXRLA6NF34 631 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 NPIPB15A6NHN6 443 aaPredicted RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 EIF4E1BA6NMX2 242 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 E5RI56 91 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 AURKAO14965 403 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 POLR3GO15318 223 aaPredicted RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 WIPF1O43516 503 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 VEGFDO43915 354 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 GJB3O75712 270 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 KLHL2O95198 593 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 PRAMEF1O95521 474 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 C2P06681 752 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 CTSLP07711 333 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 HOXC4P09017 264 aaPredicted RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 ALPIP09923 528 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 LTA4HP09960 611 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 PIRTP0C851 137 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 NEFHP12036 1026 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 HLA-EP13747 358 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 ENO3P13929 434 aaPredicted RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 BPIP17213 487 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 CHRM3P20309 590 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 TAC1P20366 129 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 MSH3P20585 1137 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 GRK2P25098 689 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 ACRV1P26436 265 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 GKP32189 559 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 MMP12P39900 470 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 CCNFP41002 786 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 SLC1A2P43004 574 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 LIG3P49916 1009 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 ARSDP51689 593 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 RPS14P62263 151 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 TMPRSS15P98073 1019 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 GABPB1Q06547 395 aaPredicted RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 PEX6Q13608 980 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 ZKSCAN8Q15776 578 aaPredicted RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 KCTD19Q17RG1 926 aaPredicted RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 COL28A1Q2UY09 1125 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 CDKL4Q5MAI5 379 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 HECTD2Q5U5R9 776 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 PTRHD1Q6GMV3 140 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 SERPINA9Q86WD7 417 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 DENND6AQ8IWF6 608 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 NXPE1Q8N323 547 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 RHEBL1Q8TAI7 183 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 STAG3L4Q8TBR4 150 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 DENND1AQ8TEH3 1009 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 GANCQ8TET4 914 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 BTN2A2Q8WVV5 523 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 COL26A1Q96A83 441 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 AP2M1Q96CW1 435 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 APOPT1Q96IL0 206 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 ELMO2Q96JJ3 720 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 MAGEB18Q96M61 343 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 COQ10AQ96MF6 247 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 LENG8Q96PV6 779 aaPredicted RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 MRPL57Q9BQC6 102 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 SELENOSQ9BQE4 189 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 AARSD1Q9BTE6 412 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 SPATA16Q9BXB7 569 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 SLC13A1Q9BZW2 595 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 PCED1AQ9H1Q7 454 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 TFB2MQ9H5Q4 396 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 CCDC134Q9H6E4 229 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 RMI1Q9H9A7 625 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 TRIM39Q9HCM9 518 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 ATP13A2Q9NQ11 1180 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 SNX15Q9NRS6 342 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 SPATS2LQ9NUQ6 558 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 FBXL12Q9NXK8 326 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 SUSD2Q9UGT4 822 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 FKBPLQ9UIM3 349 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 GPR34Q9UPC5 381 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 RUVBL2Q9Y230 463 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 APOBEC2Q9Y235 224 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 MTO1Q9Y2Z2 717 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 DHRS7Q9Y394 339 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 KCTD3Q9Y597 815 aa6.94□□□□□ -1.3
SHQ1-207ENST00000475558 ATXN2Q99700 1313 aaKnown RBP6.94□□□□□ -1.3
SHQ1-207ENST00000475558 WDFY3Q8IZQ1 3526 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 KNTC1P50748 2209 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 GOLGA4Q13439 2230 aaKnown RBP6.93□□□□□ -1.3
SHQ1-207ENST00000475558 C17orf113A0A1B0GUU1 675 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 A0A1W2PPM1 405 aa6.93□□□□□ -1.3
SHQ1-207ENST00000475558 GMNCA6NCL1 334 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms