RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SORT1Q99523 831 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 SIKE1Q9BRV8 207 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 TSR3Q9UJK0 312 aaKnown RBP13.53□□□□□ -0.24
TRAF4-210ENST00000475329 CNOT6Q9ULM6 557 aaKnown RBP13.53□□□□□ -0.24
TRAF4-210ENST00000475329 NCKAP1Q9Y2A7 1128 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 DNAJC16Q9Y2G8 782 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 USH1CQ9Y6N9 552 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 SGTAO43765 313 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 ATG13O75143 517 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 S100BP04271 92 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-210ENST00000475329 PCCBP05166 539 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 ACADMP11310 421 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 IMPDH1P20839 514 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 CD72P21854 359 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 ARRB2P32121 409 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 CCR7P32248 378 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 PRLHRP49683 370 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 ADPRHP54922 357 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 HERVK_113P63132 956 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 RPS21P63220 83 aaKnown RBP13.52□□□□□ -0.25
TRAF4-210ENST00000475329 TFF2Q03403 129 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 PRKCQQ04759 706 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 TMEM115Q12893 351 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-210ENST00000475329 GTF2H3Q13889 308 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 LRRC32Q14392 662 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 GBX1Q14549 363 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 PLEKHS1Q5SXH7 462 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 SEL1L3Q68CR1 1132 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 KIAA1324Q6UXG2 1013 aaKnown RBP13.52□□□□□ -0.25
TRAF4-210ENST00000475329 FRA10AC1Q70Z53 315 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 WDR75Q8IWA0 830 aaKnown RBP13.52□□□□□ -0.25
TRAF4-210ENST00000475329 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.52□□□□□ -0.255e-7■■■■■ 32.1
TRAF4-210ENST00000475329 ADHFE1Q8IWW8 467 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 PELI3Q8N2H9 469 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 FBXO39Q8N4B4 442 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 PTGR2Q8N8N7 351 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-210ENST00000475329 RASGEF1AQ8N9B8 481 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 OR14C36Q8NHC7 312 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 PIWIL2Q8TC59 973 aaKnown RBP13.52□□□□□ -0.25
TRAF4-210ENST00000475329 PHF21BQ96EK2 531 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 HIC2Q96JB3 615 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 CNDP1Q96KN2 507 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 MRGPRX1Q96LB2 322 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 TMEM120AQ9BXJ8 343 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 ERVK-6Q9BXR3 956 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 FAM126AQ9BYI3 521 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-210ENST00000475329 EPHX3Q9H6B9 360 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 PREBQ9HCU5 417 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 ARHGEF3Q9NR81 526 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 NUDT4Q9NZJ9 180 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 MARCOQ9UEW3 520 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-210ENST00000475329 DCTN4Q9UJW0 460 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 CA14Q9ULX7 337 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 RAP2CQ9Y3L5 183 aa13.52□□□□□ -0.25
TRAF4-210ENST00000475329 NUMA1Q14980 2115 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 A0A0G2JND7 137 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 TCRBV21S2A2A0A5A6 115 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 OR2AG2A6NM03 316 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 STX16-NPEPL1H3BU86 382 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 STX16O14662 325 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 RAD51BO15315 384 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 SNX2O60749 519 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 RNGTTO60942 597 aaKnown RBP13.51□□□□□ -0.25
TRAF4-210ENST00000475329 CHRNGP07510 517 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 MPC1LP0DKB6 136 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 KITP10721 976 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 MTHFD2P13995 350 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 NDUFV2P19404 249 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 TEAD1P28347 426 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 HK2P52789 917 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 ARFIP2P53365 341 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 NAA20P61599 178 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 DMTNQ08495 405 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 PRKAA1Q13131 559 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 BOP1Q14137 746 aaKnown RBP13.51□□□□□ -0.25
TRAF4-210ENST00000475329 PFKFB4Q16877 469 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 BCL7AQ4VC05 210 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 SYTL3Q4VX76 610 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 PNCKQ6P2M8 343 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 C6orf89Q6UWU4 347 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 TMEM92Q6UXU6 159 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 FRMD7Q6ZUT3 714 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 TRIM74Q86UV6 250 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 ELMO1Q92556 727 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 TRMOQ9BU70 441 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 C1QTNF7Q9BXJ2 289 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 ILKAPQ9H0C8 392 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-210ENST00000475329 TRIM39Q9HCM9 518 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 KCNK4Q9NYG8 393 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 CD274Q9NZQ7 290 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 MBD1Q9UIS9 605 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-210ENST00000475329 ZFR2Q9UPR6 939 aaKnown RBP13.51□□□□□ -0.25
TRAF4-210ENST00000475329 SORCS3Q9UPU3 1222 aa13.51□□□□□ -0.25
TRAF4-210ENST00000475329 MRPS17Q9Y2R5 130 aaKnown RBP13.51□□□□□ -0.25
TRAF4-210ENST00000475329 ATXN2Q99700 1313 aaKnown RBP13.5□□□□□ -0.25
TRAF4-210ENST00000475329 A0A1W2PQU0 124 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 PRR23AA6NEV1 266 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 VEGFDO43915 354 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 KLK8O60259 260 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 NUAK1O60285 661 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms