RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SQSTM1Q13501 440 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 SPARCL1Q14515 664 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 OASLQ15646 514 aaKnown RBP14.89□□□□□ -0.03
VARS-223ENST00000474643 ZDHHC20Q5W0Z9 365 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 PAPD7Q5XG87 772 aaKnown RBP14.89□□□□□ -0.03
VARS-223ENST00000474643 ANKS6Q68DC2 871 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 TMC3Q7Z5M5 1100 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 PLEKHG4BQ96PX9 1271 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 TBC1D10AQ9BXI6 508 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 SEMA4CQ9C0C4 833 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 OCIAD1Q9NX40 245 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 SPO11Q9Y5K1 396 aa14.89□□□□□ -0.03
VARS-223ENST00000474643 PCYT1BQ9Y5K3 369 aaPredicted RBP14.89□□□□□ -0.03
VARS-223ENST00000474643 SCN8AQ9UQD0 1980 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 CTAGE9A4FU28 777 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 B8ZZF3 427 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.88□□□□□ -0.03
VARS-223ENST00000474643 POLR1CO15160 346 aaPredicted RBP14.88□□□□□ -0.03
VARS-223ENST00000474643 ZNF500O60304 480 aaPredicted RBP14.88□□□□□ -0.03
VARS-223ENST00000474643 RAD1O60671 282 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 UBXN7O94888 489 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 METTL18O95568 372 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 ZNF7P17097 686 aaPredicted RBP14.88□□□□□ -0.03
VARS-223ENST00000474643 TYRP1P17643 537 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 TCP1P17987 556 aaKnown RBP14.88□□□□□ -0.03
VARS-223ENST00000474643 IDSP22304 550 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 AKT1P31749 480 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 FOXM1Q08050 763 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 OLIG2Q13516 323 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 XKR5Q6UX68 686 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 ADGRG6Q86SQ4 1221 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 DTX1Q86Y01 620 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 NAPGQ99747 312 aaPredicted RBP14.88□□□□□ -0.03
VARS-223ENST00000474643 CTRCQ99895 268 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 GORASP1Q9BQQ3 440 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 ZPBPQ9BS86 351 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 TIMM29Q9BSF4 260 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 LRRC40Q9H9A6 602 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 NFKBIL1Q9UBC1 381 aaPredicted RBP14.88□□□□□ -0.03
VARS-223ENST00000474643 RNF14Q9UBS8 474 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 TTC7AQ9ULT0 858 aaPredicted RBP14.88□□□□□ -0.03
VARS-223ENST00000474643 AHCTF1Q8WYP5 2266 aa14.88□□□□□ -0.03
VARS-223ENST00000474643 LILRA5A6NI73 299 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 C2orf81A6NN90 581 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 PGRMC1O00264 195 aaKnown RBP14.87□□□□□ -0.03
VARS-223ENST00000474643 AURKAO14965 403 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 STX7O15400 261 aaKnown RBP14.87□□□□□ -0.03
VARS-223ENST00000474643 BUD23O43709 281 aaKnown RBP14.87□□□□□ -0.03
VARS-223ENST00000474643 GAS8O95995 478 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 FAM87AP0C7U9 286 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 RPL10P27635 214 aaKnown RBP14.87□□□□□ -0.03
VARS-223ENST00000474643 UGT1A3P35503 534 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 FDFT1P37268 417 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 SPAM1P38567 509 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 CYP4F2P78329 520 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 TUBB2AQ13885 445 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 ATP13A5Q4VNC0 1218 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 FAM151BQ6UXP7 276 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 NLGN4XQ8N0W4 816 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 NLGN4YQ8NFZ3 816 aaPredicted RBP14.87□□□□□ -0.03
VARS-223ENST00000474643 BRSK1Q8TDC3 778 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 NKD1Q969G9 470 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 PMEPA1Q969W9 287 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 RTP4Q96DX8 246 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 MS4A14Q96JA4 679 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 TGM7Q96PF1 710 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 VPS35Q96QK1 796 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 OSBPL9Q96SU4 736 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 EFHD1Q9BUP0 239 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 TUBB2BQ9BVA1 445 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 AP1M1Q9BXS5 423 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 GPN2Q9H9Y4 310 aaPredicted RBP14.87□□□□□ -0.03
VARS-223ENST00000474643 RAB6BQ9NRW1 208 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.87□□□□□ -0.03
VARS-223ENST00000474643 PAK5Q9P286 719 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 SNX12Q9UMY4 172 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 DRG1Q9Y295 367 aaKnown RBP14.87□□□□□ -0.03
VARS-223ENST00000474643 ZNF462Q96JM2 2506 aa14.87□□□□□ -0.03
VARS-223ENST00000474643 ZFC3H1O60293 1989 aaKnown RBP14.86□□□□□ -0.03
VARS-223ENST00000474643 GOLGA6L10A0A0M3HER8 536 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 GLYATL1P3A0A0U1RQE8 302 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 ZNF891A8MT65 544 aaPredicted RBP14.86□□□□□ -0.03
VARS-223ENST00000474643 ZIC2O95409 532 aaPredicted RBP14.86□□□□□ -0.03
VARS-223ENST00000474643 CRTAMO95727 393 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 ETS1P14921 441 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 ADRA1AP35348 466 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 HMGCLP35914 325 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 KCNJ1P48048 391 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 SEPHS1P49903 392 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 CLCNKAP51800 687 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 DRG2P55039 364 aaKnown RBP14.86□□□□□ -0.03
VARS-223ENST00000474643 ITGA9Q13797 1035 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 SEPT6Q14141 434 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 PLCL1Q15111 1095 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 SIX1Q15475 284 aaPredicted RBP14.86□□□□□ -0.03
VARS-223ENST00000474643 LDLRAP1Q5SW96 308 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 CYB5D1Q6P9G0 228 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 DRICH1Q6PGQ1 229 aaPredicted RBP14.86□□□□□ -0.03
VARS-223ENST00000474643 BORAQ6PGQ7 559 aa14.86□□□□□ -0.03
VARS-223ENST00000474643 RANBP10Q6VN20 620 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms