RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 GRHL1Q9NZI5 618 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 IL1RAPL1Q9NZN1 696 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 MARCH4Q9P2E8 410 aaPredicted RBP12.21□□□□□ -0.45
DDX56-209ENST00000473924 ZC3H7BQ9UGR2 993 aaKnown RBP12.21□□□□□ -0.45
DDX56-209ENST00000473924 FAM169AQ9Y6X4 670 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 U3KQA8 63 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 ARID1BQ8NFD5 2236 aaPredicted RBP12.21□□□□□ -0.46
DDX56-209ENST00000473924 PCNX2A6NKB5 2137 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 BPTFQ12830 3046 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 ZCWPW2A0A1B0GU75 182 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 UBA6A0AVT1 1052 aaPredicted RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 ESYT3A0FGR9 886 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 EME2A4GXA9 379 aaPredicted RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 MGAT4DA6NG13 374 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 RHPN2P1A8MT19 583 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 TP73O15350 636 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 OR1I1O60431 355 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 FTH1P02794 183 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 CDK4P11802 303 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 F3P13726 295 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 GLB1P16278 677 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 ARNTP27540 789 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 RPL10P27635 214 aaKnown RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 HALP42357 657 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 ARCN1P48444 511 aaKnown RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 DRG2P55039 364 aaKnown RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 MAZP56270 477 aaKnown RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 NFE2L1Q14494 772 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 CRYMQ14894 314 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 RNF187Q5TA31 235 aaPredicted RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 N4BP2L1Q5TBK1 243 aaPredicted RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 ZNF470Q6ECI4 717 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 ZNF449Q6P9G9 518 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 KCNMB4Q86W47 210 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 ANKMY2Q8IV38 441 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 SFTPA2Q8IWL1 248 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 CFAP206Q8IYR0 622 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 ZBED8Q8IZ13 594 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 FBXO36Q8NEA4 188 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 OR2L2Q8NH16 312 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 MAPK15Q8TD08 544 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 CALML6Q8TD86 181 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 ART4Q93070 314 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 LINC00615Q96LM1 132 aaPredicted RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 TCF12Q99081 682 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 CCM2Q9BSQ5 444 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 TSSK1BQ9BXA7 367 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 ABCG4Q9H172 646 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 STN1Q9H668 368 aaKnown RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 EPB41L5Q9HCM4 733 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 PPANQ9NQ55 473 aaKnown RBP12.2□□□□□ -0.46
DDX56-209ENST00000473924 TOR4AQ9NXH8 423 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 LRIT1Q9P2V4 623 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 PCDHGA1Q9Y5H4 931 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 TEX264Q9Y6I9 313 aa12.2□□□□□ -0.46
DDX56-209ENST00000473924 ZFC3H1O60293 1989 aaKnown RBP12.19□□□□□ -0.46
DDX56-209ENST00000473924 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 OR5K4A6NMS3 321 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 PRMT5O14744 637 aaPredicted RBP12.19□□□□□ -0.46
DDX56-209ENST00000473924 SGTAO43765 313 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 NUDT21O43809 227 aaKnown RBP12.19□□□□□ -0.46
DDX56-209ENST00000473924 TRIM16O95361 564 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 EML2O95834 649 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 GP1BAP07359 652 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 GSTM1P09488 218 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 OGNP20774 298 aaKnown RBP12.19□□□□□ -0.46
DDX56-209ENST00000473924 EIF3BP55884 814 aaKnown RBP12.19□□□□□ -0.46
DDX56-209ENST00000473924 E2F1Q01094 437 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 GSTM4Q03013 218 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 DMPKQ09013 629 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 HLTFQ14527 1009 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX56-209ENST00000473924 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 TRADDQ15628 312 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 PTRHD1Q6GMV3 140 aaKnown RBP12.19□□□□□ -0.46
DDX56-209ENST00000473924 IYDQ6PHW0 289 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 DHRS13Q6UX07 377 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 SLC9B2Q86UD5 537 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 CCDC25Q86WR0 208 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 IGDCC3Q8IVU1 814 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 TRIM48Q8IWZ4 208 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 LMNTD2Q8IXW0 634 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 ARL14Q8N4G2 192 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 GPR150Q8NGU9 434 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 FBXO25Q8TCJ0 367 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 HM13Q8TCT9 377 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 SLC37A2Q8TED4 501 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 PYROXD1Q8WU10 500 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 CCDC74AQ96AQ1 378 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 CCDC3Q9BQI4 270 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 FAM167BQ9BTA0 163 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 SYNDIG1Q9H7V2 258 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 SAYSD1Q9NPB0 183 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 FAM114A2Q9NRY5 505 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 ACSL5Q9ULC5 683 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 PSMD13Q9UNM6 376 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 VPS9D1Q9Y2B5 631 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 PRSS21Q9Y6M0 314 aa12.19□□□□□ -0.46
DDX56-209ENST00000473924 RNF215Q9Y6U7 377 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms