RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TSPAN11A1L157 253 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 TUBAL3A6NHL2 446 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 ZNF749O43361 778 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 PAGE1O75459 146 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 KRT34O76011 436 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 USP1O94782 785 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 FBXO21O94952 628 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 RHOBTB3O94955 611 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 SOX30O94993 753 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 VENTXO95231 258 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 ZBTB11O95625 1053 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-206ENST00000471968 ASMTLO95671 621 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 IGSF6O95976 241 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 CD63P08962 238 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 SRD5A1P18405 259 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 XRCC1P18887 633 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-206ENST00000471968 PTGER1P34995 402 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 HOXD13P35453 343 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 ACVRL1P37023 503 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 SLC19A1P41440 591 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 ZFP36L2P47974 494 aaKnown RBP6.36□□□□□ -1.39
HDAC3-206ENST00000471968 PTH2RP49190 550 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 GNA12Q03113 381 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 PAK1Q13153 545 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 EIF4EBP2Q13542 120 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-206ENST00000471968 GPR18Q14330 331 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 FBLN7Q53RD9 439 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 WIPI1Q5MNZ9 446 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-206ENST00000471968 FKBP15Q5T1M5 1219 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 C6orf52Q5T4I8 152 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 DENND2CQ68D51 928 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 TREML4Q6UXN2 200 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 DEPDC4Q8N2C3 294 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 LIX1Q8N485 282 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 OR5M3Q8NGP4 307 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 PPP1R14CQ8TAE6 165 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 PARD3BQ8TEW8 1205 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 PSMF1Q92530 271 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 SNX21Q969T3 373 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 DNAJC19Q96DA6 116 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 C1orf159Q96HA4 380 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 FRMD6Q96NE9 622 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 SLC2A13Q96QE2 648 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 KCNK17Q96T54 332 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 REG4Q9BYZ8 158 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 GSX2Q9BZM3 304 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 TNMDQ9H2S6 317 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 TP63Q9H3D4 680 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-206ENST00000471968 SUV39H2Q9H5I1 410 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 RETREG1Q9H6L5 497 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 ZNF696Q9H7X3 374 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 ZNF160Q9HCG1 818 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 KLHL1Q9NR64 748 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 CISHQ9NSE2 258 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 DDIT4Q9NX09 232 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 ZNF624Q9P2J8 865 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-206ENST00000471968 GNPTGQ9UJJ9 305 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 SIK3Q9Y2K2 1263 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 SNX10Q9Y5X0 201 aa6.36□□□□□ -1.39
HDAC3-206ENST00000471968 MPDZO75970 2070 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 A0A1B0GTH9 108 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 E7EQ34 232 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 CCER2I3L3R5 266 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 RASGRF2O14827 1237 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 CYP1A1P04798 512 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-206ENST00000471968 GEMIN4P57678 1058 aaKnown RBP6.35□□□□□ -1.39
HDAC3-206ENST00000471968 CLDN10P78369 228 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 DCDP81605 110 aaKnown RBP6.35□□□□□ -1.39
HDAC3-206ENST00000471968 VEZF1Q14119 521 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 SLC25A35Q3KQZ1 300 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 AFMIDQ63HM1 303 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 MRPL14Q6P1L8 145 aaKnown RBP6.35□□□□□ -1.39
HDAC3-206ENST00000471968 FBXO38Q6PIJ6 1188 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 BRAT1Q6PJG6 821 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 ZNF783Q6ZMS7 281 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 KBTBD2Q8IY47 623 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 SHISA5Q8N114 240 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 NECAB1Q8N987 351 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 OR11G2Q8NGC1 345 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 LINC01560Q8TB33 94 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 HCAR2Q8TDS4 363 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 EXOC2Q96KP1 924 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 COQ10AQ96MF6 247 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 HES7Q9BYE0 225 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 ATG10Q9H0Y0 220 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 OSGEPL1Q9H4B0 414 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 TAS2R14Q9NYV8 317 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 MKL2Q9ULH7 1088 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 MFHAS1Q9Y4C4 1052 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 NPFFR2Q9Y5X5 522 aa6.35□□□□□ -1.39
HDAC3-206ENST00000471968 HERC2O95714 4834 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 A0A0G2JNJ9 132 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 ASPDHA6ND91 283 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 ESPNB1AK53 854 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 SYT5O00445 386 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 CTIFO43310 598 aaKnown RBP6.34□□□□□ -1.39
HDAC3-206ENST00000471968 EXOC3O60645 756 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 TMCC1O94876 653 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 HBQ1P09105 142 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 GPR1P46091 355 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms