RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 OTUD4Q01804 1114 aaKnown RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 KIR2DS5Q14953 304 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 CLPPQ16740 277 aaPredicted RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 TMEM164Q5U3C3 297 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 IRGCQ6NXR0 463 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 C16orf46Q6P387 395 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 BBS12Q6ZW61 710 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 VSIG1Q86XK7 387 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 TRAPPC5Q8IUR0 188 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 PHYKPLQ8IUZ5 450 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 RAVER1Q8IY67 606 aaKnown RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 RCOR2Q8IZ40 523 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 SLC38A9Q8NBW4 561 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 ACRBPQ8NEB7 543 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 OR4K2Q8NGD2 314 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 GDAP1Q8TB36 358 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 CCDC110Q8TBZ0 833 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 ACTL9Q8TC94 416 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 OR6C1Q96RD1 312 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 FCRL5Q96RD9 977 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 ARHGAP9Q9BRR9 750 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 B3GNT4Q9C0J1 378 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 RMI1Q9H9A7 625 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 KLHL8Q9P2G9 620 aaPredicted RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 NFKBIL1Q9UBC1 381 aaPredicted RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 FKBPLQ9UIM3 349 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 PACSIN2Q9UNF0 486 aaPredicted RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 R3HDM2Q9Y2K5 976 aaKnown RBP7.92□□□□□ -1.14
USP48-207ENST00000471752 NOTCH2Q04721 2471 aa7.92□□□□□ -1.14
USP48-207ENST00000471752 SPTBP11277 2137 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 LILRA5A6NI73 299 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 H7C0C1 242 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 POLR1CO15160 346 aaPredicted RBP7.91□□□□□ -1.14
USP48-207ENST00000471752 PSTPIP1O43586 416 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 SPAG6O75602 509 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 KIAA0754O94854 1291 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 WISP1O95388 367 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 PDGFAP04085 211 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 NTRK1P04629 796 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 POLBP06746 335 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 TPM3P06753 285 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 CTSBP07858 339 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 EBLN1P0CF75 366 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 AMD1P17707 334 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 IDSP22304 550 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 CD82P27701 267 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 ATP5OP48047 213 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 ZNF75DP51815 510 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 HADHBP55084 474 aaKnown RBP7.91□□□□□ -1.14
USP48-207ENST00000471752 POLE2P56282 527 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 RPS18P62269 152 aaKnown RBP7.91□□□□□ -1.14
USP48-207ENST00000471752 PEX6Q13608 980 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 TRIM14Q14142 442 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 TFDP2Q14188 446 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 TFDP3Q5H9I0 405 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 ANKRD20A2Q5SQ80 823 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 FNBP1LQ5T0N5 605 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 ANKRD20A1Q5TYW2 823 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 AGAP9Q5VTM2 703 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 CACHD1Q5VU97 1274 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 ANKRD20A3Q5VUR7 823 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 PWWP2BQ6NUJ5 590 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 RANBP10Q6VN20 620 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 NAPRTQ6XQN6 538 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 PRUNE1Q86TP1 453 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 NLGN4XQ8N0W4 816 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 LMNTD1Q8N9Z9 388 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 PHC3Q8NDX5 983 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 NLGN4YQ8NFZ3 816 aaPredicted RBP7.91□□□□□ -1.14
USP48-207ENST00000471752 ZNF398Q8TD17 642 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 P3H4Q92791 437 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 SLC45A3Q96JT2 553 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 RMDN2Q96LZ7 410 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 VPS35Q96QK1 796 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 MAP3K3Q99759 626 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 TIMM29Q9BSF4 260 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 ASPSCR1Q9BZE9 553 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 TRIM5Q9C035 493 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 WWP1Q9H0M0 922 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 GEMIN8Q9NWZ8 242 aaKnown RBP7.91□□□□□ -1.14
USP48-207ENST00000471752 AKAP7Q9P0M2 348 aaPredicted RBP7.91□□□□□ -1.14
USP48-207ENST00000471752 RSPH14Q9UHP6 348 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 CROTQ9UKG9 612 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 DNPEPQ9ULA0 475 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 INTUQ9ULD6 942 aa7.91□□□□□ -1.14
USP48-207ENST00000471752 TMEM184BQ9Y519 407 aaPredicted RBP7.91□□□□□ -1.14
USP48-207ENST00000471752 EPN1Q9Y6I3 576 aaPredicted RBP7.91□□□□□ -1.14
USP48-207ENST00000471752 MN1Q10571 1320 aaPredicted RBP7.91□□□□□ -1.14
USP48-207ENST00000471752 GLYATL1P3A0A0U1RQE8 302 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 CCDC78A2IDD5 438 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 OR5K4A6NMS3 321 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 HCRTR1O43613 425 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 VEGFDO43915 354 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 RASSF9O75901 435 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 DNAJB5O75953 348 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 METTL18O95568 372 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 EPOP01588 193 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 MAP4P27816 1152 aaKnown RBP7.9□□□□□ -1.14
USP48-207ENST00000471752 PDHA2P29803 388 aa7.9□□□□□ -1.14
USP48-207ENST00000471752 SPAM1P38567 509 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms