RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 V9GYY5 206 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 GOLGA6CA6NDK9 693 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 GOLGA6BA6NDN3 693 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 EFCAB7A8K855 629 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 ERI2A8K979 691 aaKnown RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 DNALI1O14645 258 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 FZD6O60353 706 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 ANXA9O76027 345 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 SEC31AO94979 1220 aaKnown RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 NTRK1P04629 796 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 HLA-DQB2P05538 268 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 GOLGA6DP0CG33 693 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 ZNF30P17039 623 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 CES1P23141 567 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 MPSTP25325 297 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 IVDP26440 423 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 MAP4P27816 1152 aaKnown RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 TNFRSF8P28908 595 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 MAGEA6P43360 314 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 GPR1P46091 355 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 RPL21P46778 160 aaKnown RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 BASP1P80723 227 aaKnown RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 MC2RQ01718 297 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 CAV1Q03135 178 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 CDC20Q12834 499 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 SEMA5AQ13591 1074 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 UBAP2LQ14157 1087 aaKnown RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 MORF4L2Q15014 288 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 CRTC2Q53ET0 693 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 ARMC12Q5T9G4 340 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 IZUMO3Q5VZ72 239 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 ANKS6Q68DC2 871 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 ALG1LQ6GMV1 187 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 WDR93Q6P2C0 686 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 DOK6Q6PKX4 331 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 WDR74Q6RFH5 385 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 CEACAM20Q6UY09 585 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 PRUNE1Q86TP1 453 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 HOOK3Q86VS8 718 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 FAM129CQ86XR2 697 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 RAVER1Q8IY67 606 aaKnown RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 NLGN4XQ8N0W4 816 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 CNTD1Q8N815 330 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 NLGN4YQ8NFZ3 816 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 OR10G6Q8NH81 332 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 C9orf43Q8TAL5 461 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 PIH1D2Q8WWB5 315 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 KIAA1143Q96AT1 154 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 AP2M1Q96CW1 435 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 COX14Q96I36 57 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 FCRL5Q96RD9 977 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 ZPBPQ9BS86 351 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 CEP41Q9BYV8 373 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 POLR1EQ9GZS1 481 aaKnown RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 SLC25A51Q9H1U9 297 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 ABCG8Q9H221 673 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 DPH5Q9H2P9 285 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 GPN2Q9H9Y4 310 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 GLOD4Q9HC38 313 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 SARS2Q9NP81 518 aaKnown RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 NT5MQ9NPB1 228 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 EIF2B3Q9NR50 452 aaKnown RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 FBXO8Q9NRD0 319 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 RAB6BQ9NRW1 208 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 GOLGA6AQ9NYA3 693 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 SHOC2Q9UQ13 582 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 SNX24Q9Y343 169 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 PLEKHM1Q9Y4G2 1056 aa8.96□□□□□ -0.98
SF3A1-206ENST00000471037 TMEM184BQ9Y519 407 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-206ENST00000471037 RELNP78509 3460 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 FLNCQ14315 2725 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 A0A0J9YYE9 177 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 LOC101059948A0A1B0GTJ6 334 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 E7EVH7 732 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 NKX2-8O15522 239 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 PSMD3O43242 534 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 METTL18O95568 372 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 DLGAP3O95886 979 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 TRBC1P01850 177 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 NFKB1P19838 968 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 TPSB2P20231 275 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 PSMB4P28070 264 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 CD68P34810 354 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-206ENST00000471037 EPHA4P54764 986 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 MAXP61244 160 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 CDK16Q00536 496 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 MC1RQ01726 317 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 ABHD18Q0P651 414 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 PTPRRQ15256 657 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 TPSAB1Q15661 275 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 SLC14A2Q15849 920 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 RNASEH2BQ5TBB1 312 aaKnown RBP8.95□□□□□ -0.98
SF3A1-206ENST00000471037 LRRC66Q68CR7 880 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 HIBCHQ6NVY1 386 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-206ENST00000471037 TIPARPQ7Z3E1 657 aaKnown RBP8.95□□□□□ -0.98
SF3A1-206ENST00000471037 ZNF761Q86XN6 746 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-206ENST00000471037 GALNT13Q8IUC8 556 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 KLHDC8BQ8IXV7 354 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 PPIL6Q8IXY8 311 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 NRSN1Q8IZ57 195 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms