RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 FOPNLQ96NB1 174 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 MRPL57Q9BQC6 102 aaKnown RBP9.62□□□□□ -0.87
CCM2-204ENST00000470837 CAPS2Q9BXY5 557 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 FAM126AQ9BYI3 521 aaPredicted RBP9.62□□□□□ -0.87
CCM2-204ENST00000470837 DERL2Q9GZP9 239 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 MRPL46Q9H2W6 279 aaKnown RBP9.62□□□□□ -0.87
CCM2-204ENST00000470837 C6orf106Q9H6K1 298 aaPredicted RBP9.62□□□□□ -0.87
CCM2-204ENST00000470837 RMI1Q9H9A7 625 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 MLXIPLQ9NP71 852 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 FZD3Q9NPG1 666 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 AASDHPPTQ9NRN7 309 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 ATXN10Q9UBB4 475 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 ZNHIT2Q9UHR6 403 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 TMPRSS11EQ9UL52 423 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 CNOT6Q9ULM6 557 aaKnown RBP9.62□□□□□ -0.87
CCM2-204ENST00000470837 TMEM98Q9Y2Y6 226 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 HS3ST3A1Q9Y663 406 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 PRSS21Q9Y6M0 314 aa9.62□□□□□ -0.87
CCM2-204ENST00000470837 A0A1W2PPC4 97 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 K7ESF4 209 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 BTN3A1O00481 513 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 LIN7AO14910 233 aaPredicted RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 KMOO15229 486 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 RAD51BO15315 384 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 GRID2O43424 1007 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 PI15O43692 258 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 NUAK1O60285 661 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 PLIN3O60664 434 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 SMIM24O75264 130 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 PDGFBP01127 241 aaPredicted RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 HOXC4P09017 264 aaPredicted RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 MYL2P10916 166 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 CPA3P15088 417 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 ZNF8P17098 575 aaPredicted RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 TFEBP19484 476 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 CD27P26842 260 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 CA5AP35218 305 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 IGFALSP35858 605 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 MDH1P40925 334 aaKnown RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 CLCN7P51798 805 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 CLDN2P57739 230 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 KIAA1024LP59773 190 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 CSTF1Q05048 431 aaKnown RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 NFATC4Q14934 902 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 WDR45BQ5MNZ6 344 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 C16orf46Q6P387 395 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 SH2D5Q6ZV89 423 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 LPCAT2Q7L5N7 544 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 RAB44Q7Z6P3 723 aaPredicted RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 CLEC14AQ86T13 490 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 AMZ2Q86W34 360 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 GALNT13Q8IUC8 556 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 NUDCD3Q8IVD9 361 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 C1orf210Q8IVY1 113 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 CPNE9Q8IYJ1 553 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 RGL4Q8IZJ4 473 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 PELI3Q8N2H9 469 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 SPATA6LQ8N4H0 392 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 FAM160A2Q8N612 972 aaPredicted RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 STAG3L4Q8TBR4 150 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 LRRC8CQ8TDW0 803 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 FUBP1Q96AE4 644 aaKnown RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 BIRC7Q96CA5 298 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 CCDC126Q96EE4 140 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 TRIM54Q9BYV2 358 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 TFB2MQ9H5Q4 396 aaKnown RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 SLC17A7Q9P2U7 560 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 FAM8A1Q9UBU6 413 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 TSR3Q9UJK0 312 aaKnown RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 RNF112Q9ULX5 631 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 INVSQ9Y283 1065 aa9.61□□□□□ -0.87
CCM2-204ENST00000470837 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 DNMT3AQ9Y6K1 912 aaPredicted RBP9.61□□□□□ -0.87
CCM2-204ENST00000470837 C17orf113A0A1B0GUU1 675 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 WDR91A4D1P6 747 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 MGAT4DA6NG13 374 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 METTL12A8MUP2 240 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 BIRC5O15392 142 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 SNX2O60749 519 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 KCNJ13O60928 360 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 H2AFYO75367 372 aaKnown RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 POP7O75817 140 aaKnown RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 HIST1H2AGP0C0S8 130 aaPredicted RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 TPBGLP0DKB5 382 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 HIST1H2ADP20671 130 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 MAP4P27816 1152 aaKnown RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 AOAHP28039 575 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 CCR7P32248 378 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 SERPINB4P48594 390 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 CTSCP53634 463 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 PRKAA2P54646 552 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 GYS2P54840 703 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 GNGT1P63211 74 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 GUCY1A3Q02108 690 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 KHDC1Q4VXA5 237 aaKnown RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 ATG16L1Q676U5 607 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 TTC23LQ6PF05 361 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 ENPP7Q6UWV6 458 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 Q6ZSR6 202 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 CDHR3Q6ZTQ4 885 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms