RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 RNF220Q5VTB9 566 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 PAOXQ6QHF9 649 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 PRSS55Q6UWB4 352 aaPredicted RBP7.91□□□□□ -1.14
SMC4-212ENST00000470240 TMEM207Q6UWW9 146 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 LAYNQ6UX15 382 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 AQP12AQ8IXF9 295 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 FAM126BQ8IXS8 530 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 RBFAQ8N0V3 343 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 CARNMT1Q8N4J0 409 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 MINDY1Q8N5J2 469 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 RNF148Q8N7C7 305 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 DCAF4L2Q8NA75 395 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 CD99L2Q8TCZ2 262 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 ZFAND2BQ8WV99 257 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 POP5Q969H6 163 aaKnown RBP7.91□□□□□ -1.14
SMC4-212ENST00000470240 ATP6V1E2Q96A05 226 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 LINGO1Q96FE5 620 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 EXOC2Q96KP1 924 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 CNBD2Q96M20 576 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 PRICKLE1Q96MT3 831 aaPredicted RBP7.91□□□□□ -1.14
SMC4-212ENST00000470240 PKP2Q99959 881 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 HGH1Q9BTY7 390 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 EPB41L1Q9H4G0 881 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 SEMA4BQ9NPR2 832 aaPredicted RBP7.91□□□□□ -1.14
SMC4-212ENST00000470240 SDR39U1Q9NRG7 319 aaPredicted RBP7.91□□□□□ -1.14
SMC4-212ENST00000470240 ZIM2Q9NZV7 527 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 TMEM181Q9P2C4 612 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 PACSIN3Q9UKS6 424 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 PADI4Q9UM07 663 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 ZNF711Q9Y462 761 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 ANGPTL3Q9Y5C1 460 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 DNAJC15Q9Y5T4 150 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 SNX13Q9Y5W8 968 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 COMMD3-BMI1R4GMX3 469 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 CHD5Q8TDI0 1954 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 TTC3P53804 2025 aa7.91□□□□□ -1.14
SMC4-212ENST00000470240 ELOA3CA0A087WX78 387 aaPredicted RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 ATP6AP2A0A1C7CYW4 349 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 TCRBV3S1A0A5B6 114 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 NCF1BA6NI72 391 aaPredicted RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 ELOA3DA6NLF2 546 aaPredicted RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 ENO4A6NNW6 628 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 NCF1CA8MVU1 366 aaPredicted RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 NT5C1B-RDH14C9J2C7 533 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 FBP2O00757 339 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 UBFD1O14562 309 aaKnown RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 PRMT5O14744 637 aaPredicted RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 KLK8O60259 260 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 TSPAN3O60637 253 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 SLC22A3O75751 556 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 ATP6AP2O75787 350 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 SIX3O95343 332 aaPredicted RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 IGSF6O95976 241 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 OTCP00480 354 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 URODP06132 367 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 GPIP06744 558 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 LINC00032P0C843 101 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 PABPC4LP0CB38 370 aaKnown RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 UMPSP11172 480 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 HSD17B1P14061 328 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 NCF1P14598 390 aaPredicted RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 TSPAN8P19075 237 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 CR2P20023 1033 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 RPS3P23396 243 aaKnown RBP eCLIP7.9□□□□□ -1.147e-64■■■■■ 337.8
SMC4-212ENST00000470240 DGKAP23743 735 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 NFKBIAP25963 317 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 HMOX2P30519 316 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 PIK3CGP48736 1102 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 ATXN3P54252 364 aaPredicted RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 EEFSECP57772 596 aaKnown RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 ERVK-8P63133 956 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 MS4A2Q01362 244 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 RALGDSQ12967 914 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 SEMA3AQ14563 771 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 RBBP5Q15291 538 aaKnown RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 CYTH1Q15438 398 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 ELOA3BQ3SY89 546 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 NCEH1Q6PIU2 408 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 UGT2A3Q6UWM9 527 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 C16orf59Q7L2K0 433 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 GALNT13Q8IUC8 556 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 GALNT15Q8N3T1 639 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 GALNT4Q8N4A0 578 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 AADATQ8N5Z0 425 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 TNIP2Q8NFZ5 429 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 ELOA3Q8NG57 546 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 ZNF461Q8TAF7 563 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 SHKBP1Q8TBC3 707 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 ZNF483Q8TF39 744 aaPredicted RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 BHMTQ93088 406 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 FUBP1Q96AE4 644 aaKnown RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 TMEM169Q96HH4 297 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 MYRFLQ96LU7 910 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 PPP3R2Q96LZ3 170 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 ZNF558Q96NG5 402 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 ZNF382Q96SR6 550 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 SH3GL3Q99963 347 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 KCTD14Q9BQ13 255 aaPredicted RBP7.9□□□□□ -1.14
SMC4-212ENST00000470240 C9orf16Q9BUW7 83 aa7.9□□□□□ -1.14
SMC4-212ENST00000470240 FAM126AQ9BYI3 521 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms