RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 SNF8Q96H20 258 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 SIGLEC10Q96LC7 697 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 TTC25Q96NG3 672 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 KRT12Q99456 494 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 CCDC3Q9BQI4 270 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 WDR83Q9BRX9 315 aaKnown RBP8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 NAT9Q9BTE0 207 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 SCNM1Q9BWG6 230 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 EPB41L1Q9H4G0 881 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 VPS37BQ9H9H4 285 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 KLC4Q9NSK0 619 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 CATSPERZQ9NTU4 200 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 POT1Q9NUX5 634 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 MARCH4Q9P2E8 410 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 DKK4Q9UBT3 224 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 KLK13Q9UKR3 277 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 MRFAP1Q9Y605 127 aa8.15□□□□□ -1.1
TRAPPC3-206ENST00000469757 FREM2Q5SZK8 3169 aa8.15□□□□□ -1.11
TRAPPC3-206ENST00000469757 WDFY3Q8IZQ1 3526 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 EPG5Q9HCE0 2579 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 ADAMTS20P59510 1910 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 A0A1W2PQM1 296 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 MAGEB16A2A368 324 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 CCDC78A2IDD5 438 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 CPED1A4D0V7 1026 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 SDR42E2A6NKP2 422 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 BHMG1C9JSJ3 638 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 E7ESA3 106 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 RAD51CO43502 376 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 POP7O75817 140 aaKnown RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 TOP3BO95985 862 aaKnown RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 FTH1P02794 183 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 PGAM1P18669 254 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 XRCC1P18887 633 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 PAMP19021 973 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 RPS3P23396 243 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 CCKBRP32239 447 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 CSF2RBP32927 897 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 RPL21P46778 160 aaKnown RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 TTPAP49638 278 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 GPLD1P80108 840 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 C2orf54Q08AI8 447 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 RPA4Q13156 261 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 TUBB2AQ13885 445 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 CRYMQ14894 314 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 DNAJC21Q5F1R6 531 aaKnown RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 STEAP4Q687X5 459 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 IGF2-ASQ6U949 168 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 RBM44Q6ZP01 1051 aaKnown RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 FAM83HQ6ZRV2 1179 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 LRRC6Q86X45 466 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 SLITRK4Q8IW52 837 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 RBM12BQ8IXT5 1001 aaKnown RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 LMNTD2Q8IXW0 634 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 SEC14L1Q92503 715 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 LPGAT1Q92604 370 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 LRRC39Q96DD0 335 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 TRIM44Q96DX7 344 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 SGF29Q96ES7 293 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 STAMBPL1Q96FJ0 436 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 DCUN1D1Q96GG9 259 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 LIN37Q96GY3 246 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 DEPDC7Q96QD5 511 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 TRIM56Q9BRZ2 755 aaKnown RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 TUBB2BQ9BVA1 445 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 P2RY12Q9H244 342 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 OSGEPL1Q9H4B0 414 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 FAM96AQ9H5X1 160 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 PLAC1Q9HBJ0 212 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 GRHL1Q9NZI5 618 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 SCHIP1Q9P0W5 487 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 SAMD15Q9P1V8 674 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 WHRNQ9P202 907 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 LRIT1Q9P2V4 623 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 CPNE7Q9UBL6 633 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 ACSL5Q9ULC5 683 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 CLCA2Q9UQC9 943 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 ASXL3Q9C0F0 2248 aa8.14□□□□□ -1.11
TRAPPC3-206ENST00000469757 MN1Q10571 1320 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 RP1P56715 2156 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 IGHV1OR21-1A0A087WYE8 117 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 F8W8V4 182 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 GOLGA8MH3BSY2 632 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 PRMT5O14744 637 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 LIN7AO14910 233 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 PPM1DO15297 605 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 CD3EAPO15446 510 aaKnown RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 VAPBO95292 243 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 TTC4O95801 387 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 CAPNS1P04632 268 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 RPLP0P05388 317 aaKnown RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 MTHFD1P11586 935 aaKnown RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 IDSP22304 550 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 PPARGP37231 505 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 ITGA8P53708 1063 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 HHEXQ03014 270 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 SPIDRQ14159 915 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 NFE2L1Q14494 772 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 HIF1AQ16665 826 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 ANKRD20A4Q4UJ75 823 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms