RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MKRN2OSH3BPM6 223 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 KRT1P04264 644 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 FECHP22830 423 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 PBLDP30039 288 aaPredicted RBP12.01□□□□□ -0.49
HDAC3-204ENST00000469207 TUBB3Q13509 450 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 PDK1Q15118 436 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 RPE65Q16518 533 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 SLC18A3Q16572 532 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDAC3-204ENST00000469207 AGAP9Q5VTM2 703 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 CPZQ66K79 652 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 PDPK2PQ6A1A2 396 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 LCN10Q6JVE6 187 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 CCDC70Q6NSX1 233 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 DUS1LQ6P1R4 473 aaKnown RBP12.01□□□□□ -0.49
HDAC3-204ENST00000469207 WASH2PQ6VEQ5 465 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 MICALCLQ6ZW33 695 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 SIDT2Q8NBJ9 832 aaKnown RBP12.01□□□□□ -0.49
HDAC3-204ENST00000469207 SLC38A9Q8NBW4 561 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 TEKT5Q96M29 485 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 TTC25Q96NG3 672 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 VPS35Q96QK1 796 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 CHP1Q99653 195 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 NRTNQ99748 197 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 ACTL8Q9H568 366 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 WASH6PQ9NQA3 447 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 RAD18Q9NS91 495 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 SPTLC3Q9NUV7 552 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 NFKBIL1Q9UBC1 381 aaPredicted RBP12.01□□□□□ -0.49
HDAC3-204ENST00000469207 FAM8A1Q9UBU6 413 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 EPHA6Q9UF33 1036 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 KCND3Q9UK17 655 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 RARRES3Q9UL19 164 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 PCDHGA6Q9Y5G7 932 aa12.01□□□□□ -0.49
HDAC3-204ENST00000469207 A0A0A6YYK5 440 aaPredicted RBP12□□□□□ -0.49
HDAC3-204ENST00000469207 LOC285095A0A1B0GVY8 99 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 RFPL1O75677 317 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 TMEM253P0C7T8 217 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 PECAM1P16284 738 aaPredicted RBP12□□□□□ -0.49
HDAC3-204ENST00000469207 NFKB1P19838 968 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 GNLYP22749 145 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 HNRNPH3P31942 346 aaKnown RBP12□□□□□ -0.49
HDAC3-204ENST00000469207 HMGCLP35914 325 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 ARCN1P48444 511 aaKnown RBP12□□□□□ -0.49
HDAC3-204ENST00000469207 CD97P48960 835 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 CCL11P51671 97 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 WNT3AP56704 352 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 WASHC5Q12768 1159 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 SEMA5AQ13591 1074 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 GTF2H3Q13889 308 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 GPR19Q15760 415 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 NADK2Q4G0N4 442 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 SIRPB2Q5JXA9 342 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 KAZNQ674X7 775 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 KDELC1Q6UW63 502 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 FAM151BQ6UXP7 276 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 DET1Q7L5Y6 550 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 AMZ2Q86W34 360 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
HDAC3-204ENST00000469207 OXNAD1Q96HP4 312 aaPredicted RBP12□□□□□ -0.49
HDAC3-204ENST00000469207 SLC41A2Q96JW4 573 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 MRGPRX2Q96LB1 330 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 INSM2Q96T92 566 aaPredicted RBP12□□□□□ -0.49
HDAC3-204ENST00000469207 XPO4Q9C0E2 1151 aaKnown RBP12□□□□□ -0.49
HDAC3-204ENST00000469207 C10orf88Q9H8K7 445 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 PDE7BQ9NP56 450 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 IL17CQ9P0M4 197 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 SEMA5BQ9P283 1151 aa12□□□□□ -0.49
HDAC3-204ENST00000469207 ARGFXA6NJG6 315 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 TTLL8A6PVC2 850 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 GAPDHSO14556 408 aaPredicted RBP11.99□□□□□ -0.49
HDAC3-204ENST00000469207 PPP1R12AO14974 1030 aaPredicted RBP11.99□□□□□ -0.49
HDAC3-204ENST00000469207 LCA5LO95447 670 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 HALP42357 657 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 PMS2P54278 862 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 TPM4P67936 248 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 IL10RAQ13651 578 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 PPP2R5EQ16537 467 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 GPRC6AQ5T6X5 926 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 ZC3H18Q86VM9 953 aaKnown RBP11.99□□□□□ -0.49
HDAC3-204ENST00000469207 RHOT1Q8IXI2 618 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 LILRA3Q8N6C8 439 aaPredicted RBP11.99□□□□□ -0.49
HDAC3-204ENST00000469207 BLOC1S5Q8TDH9 187 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 HAUS1Q96CS2 278 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 RAB33BQ9H082 229 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 WWP1Q9H0M0 922 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 GOLPH3Q9H4A6 298 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 FGF21Q9NSA1 209 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 IMP3Q9NV31 184 aaKnown RBP11.99□□□□□ -0.49
HDAC3-204ENST00000469207 HRASLS2Q9NWW9 162 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 FAM153AQ9UHL3 310 aa11.99□□□□□ -0.49
HDAC3-204ENST00000469207 MED13Q9UHV7 2174 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 OR6C74A6NCV1 312 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 AKR1B10O60218 316 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 CST8O60676 142 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 MT-ND3P03897 115 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 POLBP06746 335 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 RNF224P0DH78 156 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 VCLP18206 1134 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 COMTP21964 271 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms