RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 SEMA6AQ9H2E6 1030 aa5.05□□□□□ -1.6
XRN1-207ENST00000468894 SMARCAD1Q9H4L7 1026 aa5.05□□□□□ -1.6
XRN1-207ENST00000468894 MBNL1Q9NR56 388 aaKnown RBP5.05□□□□□ -1.6
XRN1-207ENST00000468894 TBC1D22BQ9NU19 505 aa5.05□□□□□ -1.6
XRN1-207ENST00000468894 MAP3K20Q9NYL2 800 aaKnown RBP5.05□□□□□ -1.6
XRN1-207ENST00000468894 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.05□□□□□ -1.6
XRN1-207ENST00000468894 DNAJB4Q9UDY4 337 aa5.05□□□□□ -1.6
XRN1-207ENST00000468894 EXO1Q9UQ84 846 aaKnown RBP5.05□□□□□ -1.6
XRN1-207ENST00000468894 GREB1LQ9C091 1923 aaPredicted RBP5.05□□□□□ -1.6
XRN1-207ENST00000468894 A0A1W2PPI3 338 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 MITFO75030 526 aaPredicted RBP5.04□□□□□ -1.6
XRN1-207ENST00000468894 BMP10O95393 424 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 GCNT3O95395 438 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 LIPFP07098 398 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 KRT19P08727 400 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 MMP9P14780 707 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 HOXD13P35453 343 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 GLIPR1P48060 266 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 PPP2R2BQ00005 443 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 MC1RQ01726 317 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 KIR2DS3Q14952 304 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 HYIQ5T013 277 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 PLA2G4FQ68DD2 849 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 PACS1Q6VY07 963 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 ANO5Q75V66 913 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 TMTC2Q8N394 836 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 SMPDL3BQ92485 455 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 TIGD1Q96MW7 591 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 SLC22A12Q96S37 553 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 GHITMQ9H3K2 345 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 HRH4Q9H3N8 390 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 UPF2Q9HAU5 1272 aaKnown RBP5.04□□□□□ -1.6
XRN1-207ENST00000468894 MDFICQ9P1T7 246 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 TBC1D29Q9UFV1 150 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 YIPF1Q9Y548 306 aa5.04□□□□□ -1.6
XRN1-207ENST00000468894 A6NCN8 305 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 FAM72CH0Y354 149 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 PAPSS1O43252 624 aaPredicted RBP5.03□□□□□ -1.6
XRN1-207ENST00000468894 TFAP2AP05549 437 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 CFC1BP0CG36 223 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 CFC1P0CG37 223 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 PRLRP16471 622 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 NMBRP28336 390 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 SUOXP51687 545 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 EIF5P55010 431 aaKnown RBP5.03□□□□□ -1.6
XRN1-207ENST00000468894 MFAP4P55083 255 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 MRPS5P82675 430 aaKnown RBP5.03□□□□□ -1.6
XRN1-207ENST00000468894 CREB5Q02930 508 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 KCNC3Q14003 757 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 RBM39Q14498 530 aaKnown RBP5.03□□□□□ -1.6
XRN1-207ENST00000468894 MEA1Q16626 185 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 RAB41Q5JT25 222 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 WDR38Q5JTN6 314 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 FAM72AQ5TYM5 149 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 FAM72DQ6L9T8 149 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 FAM72BQ86X60 149 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 MCEMP1Q8IX19 187 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 CEP295NLQ96MC4 621 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 FAM118AQ9NWS6 357 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 KIF26BQ2KJY2 2108 aa5.03□□□□□ -1.6
XRN1-207ENST00000468894 TEX13DA0A0J9YY54 714 aaPredicted RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 C15orf62A8K5M9 175 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 SYNCRIPO60506 623 aaKnown RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 GJB3O75712 270 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 RSL1D1O76021 490 aaKnown RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 SLC15A1P46059 708 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 GAGE2BQ13066 116 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 MAPRE1Q15691 268 aaKnown RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 GAGE2EQ4V326 116 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 NDUFAF5Q5TEU4 345 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 GAGE2AQ6NT46 116 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 GALNT5Q7Z7M9 940 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 AACSQ86V21 672 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 PTOV1Q86YD1 416 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 KLHDC8BQ8IXV7 354 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 RDM1Q8NG50 284 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 LRRC59Q96AG4 307 aaKnown RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 ZNF524Q96C55 264 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 ZNF501Q96CX3 271 aaPredicted RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 ZNF582Q96NG8 517 aaPredicted RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 SLA2Q9H6Q3 261 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 HAUS2Q9NVX0 235 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 WSB2Q9NYS7 404 aaPredicted RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 SUCLA2Q9P2R7 463 aaPredicted RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 GAGE2DQ9UEU5 116 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 SEC63Q9UGP8 760 aaKnown RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 ZNF215Q9UL58 517 aaPredicted RBP5.02□□□□□ -1.61
XRN1-207ENST00000468894 TCF19Q9Y242 345 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 PCDHGA5Q9Y5G8 931 aa5.02□□□□□ -1.61
XRN1-207ENST00000468894 LNP1A1A4G5 178 aa5.01□□□□□ -1.61
XRN1-207ENST00000468894 NDUFS4O43181 175 aa5.01□□□□□ -1.61
XRN1-207ENST00000468894 PRSS1P07477 247 aa5.01□□□□□ -1.61
XRN1-207ENST00000468894 NAP1L1P55209 391 aaKnown RBP5.01□□□□□ -1.61
XRN1-207ENST00000468894 CXCL9Q07325 125 aa5.01□□□□□ -1.61
XRN1-207ENST00000468894 PLEKHS1Q5SXH7 462 aa5.01□□□□□ -1.61
XRN1-207ENST00000468894 FAM109BQ6ICB4 259 aaPredicted RBP5.01□□□□□ -1.61
XRN1-207ENST00000468894 ZNF449Q6P9G9 518 aa5.01□□□□□ -1.61
XRN1-207ENST00000468894 TBC1D16Q8TBP0 767 aa5.01□□□□□ -1.61
XRN1-207ENST00000468894 ZNF473Q8WTR7 871 aaKnown RBP5.01□□□□□ -1.61
XRN1-207ENST00000468894 SEMA4DQ92854 862 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms