RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 GRTP1Q5TC63 336 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 CNSTQ6PJW8 725 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 DET1Q7L5Y6 550 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 ALYREFQ86V81 257 aaKnown RBP14.95□□□□□ -0.02
NPHP4-205ENST00000466897 CTAGE3PQ8IX95 158 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 PPM1NQ8N819 430 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 PNPLA1Q8N8W4 532 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 OR2L2Q8NH16 312 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 UBLCP1Q8WVY7 318 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-205ENST00000466897 SLC44A1Q8WWI5 657 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 KCNJ9Q92806 393 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 RBBP8Q99708 897 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 CCM2Q9BSQ5 444 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 AARSD1Q9BTE6 412 aaKnown RBP14.95□□□□□ -0.02
NPHP4-205ENST00000466897 LRRC61Q9BV99 259 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 GSDMCQ9BYG8 508 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 CCDC68Q9H2F9 335 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 GAREM1Q9H706 876 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 LATS2Q9NRM7 1088 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 DNAAF2Q9NVR5 837 aaKnown RBP14.95□□□□□ -0.02
NPHP4-205ENST00000466897 KLHL42Q9P2K6 505 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 SLC17A6Q9P2U8 582 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 ZNHIT2Q9UHR6 403 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 MOSPD1Q9UJG1 213 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 ZNF180Q9UJW8 692 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 CRYL1Q9Y2S2 319 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 PCDHGB2Q9Y5G2 931 aa14.95□□□□□ -0.02
NPHP4-205ENST00000466897 KPNA5O15131 536 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 PCDHGA12O60330 932 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 POP7O75817 140 aaKnown RBP14.94□□□□□ -0.02
NPHP4-205ENST00000466897 CTSEP14091 401 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 LIMK2P53671 638 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 ARHGAP8P85298 464 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 PLOD1Q02809 727 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-205ENST00000466897 ILF3Q12906 894 aaKnown RBP eCLIP14.94□□□□□ -0.02
NPHP4-205ENST00000466897 EFTUD2Q15029 972 aaKnown RBP eCLIP14.94□□□□□ -0.02
NPHP4-205ENST00000466897 PRRT3Q5FWE3 981 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 PTRHD1Q6GMV3 140 aaKnown RBP14.94□□□□□ -0.02
NPHP4-205ENST00000466897 TCEAL6Q6IPX3 200 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 ZNF549Q6P9A3 640 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 LVRNQ6Q4G3 990 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 CRTC3Q6UUV7 619 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 PRR23CQ6ZRP0 262 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 KANSL1Q7Z3B3 1105 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 AMZ2Q86W34 360 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 MINDY1Q8N5J2 469 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 ZNF548Q8NEK5 533 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-205ENST00000466897 HM13Q8TCT9 377 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 TCEAL3Q969E4 200 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 VPS39Q96JC1 886 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 CCDC77Q9BR77 488 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 DHRS4Q9BTZ2 278 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 TMEM168Q9H0V1 697 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 TCEAL2Q9H3H9 227 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-205ENST00000466897 SMOC1Q9H4F8 434 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 PARD6AQ9NPB6 346 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 FSCN3Q9NQT6 498 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 GULP1Q9UBP9 304 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 GPSM3Q9Y4H4 160 aa14.94□□□□□ -0.02
NPHP4-205ENST00000466897 CABIN1Q9Y6J0 2220 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 EXOC1LA0A1B0GW35 172 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 NEMP2A6NFY4 417 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 LMO7DNF2Z398 122 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 TPP1O14773 563 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 LIN7AO14910 233 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-205ENST00000466897 AQP9O43315 295 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 TCEA3O75764 348 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 ACP5P13686 325 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 DGKAP23743 735 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 CNTFP26441 200 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 FMO4P31512 558 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 SPRP35270 261 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-205ENST00000466897 ATXN3P54252 364 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-205ENST00000466897 CTBSQ01459 385 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 RPA4Q13156 261 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 SLC14A1Q13336 389 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 RASA2Q15283 850 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 SF3A2Q15428 464 aaKnown RBP14.93□□□□□ -0.02
NPHP4-205ENST00000466897 INSCQ1MX18 579 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 ZNF542PQ5EBM4 170 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 BEND6Q5SZJ8 279 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-205ENST00000466897 FAM45BPQ6NSW5 357 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 WASH2PQ6VEQ5 465 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 CHST15Q7LFX5 561 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-205ENST00000466897 ASCL5Q7RTU5 278 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 RD3Q7Z3Z2 195 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 GKN2Q86XP6 184 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 FAM45AQ8TCE6 357 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 SAP25Q8TEE9 199 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 PAFAH2Q99487 392 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 GPR22Q99680 433 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 WASH6PQ9NQA3 447 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 SPATS2LQ9NUQ6 558 aaKnown RBP14.93□□□□□ -0.02
NPHP4-205ENST00000466897 SLC23A2Q9UGH3 650 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 SLC24A2Q9UI40 661 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 PCOLCE2Q9UKZ9 415 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 MED16Q9Y2X0 877 aa14.93□□□□□ -0.02
NPHP4-205ENST00000466897 SCAMP1O15126 338 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 PIAS1O75925 651 aa14.92□□□□□ -0.02
NPHP4-205ENST00000466897 INHBAP08476 426 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms