RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 DLG1Q12959 904 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 MYBPHQ13203 477 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 PTPRCAPQ14761 206 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 LETM2Q2VYF4 491 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF260Q3ZCT1 412 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 TMEM35AQ53FP2 167 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 RAB6CQ53S08 254 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 AWAT2Q6E213 333 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 PLEKHM3Q6ZWE6 761 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 Q75L30 129 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 IQCHQ86VS3 1027 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 C1orf87Q8N0U7 546 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 FBXO39Q8N4B4 442 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 RBMXL3Q8N7X1 1067 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 B4GALNT2Q8NHY0 566 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 CAMK1GQ96NX5 476 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 MS4A10Q96PG2 267 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 OR6C1Q96RD1 312 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 TMEM204Q9BSN7 226 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 SLC25A23Q9BV35 468 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 RAB6CQ9H0N0 254 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 IL25Q9H293 177 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 UBTD1Q9HAC8 227 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 SELENONQ9NZV5 590 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 STK26Q9P289 416 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 B3GALT5Q9Y2C3 310 aa4.25□□□□□ -1.73
CDC42BPA-211ENST00000466538 CKAP5Q14008 2032 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 URADA6NGE7 173 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 INO80B-WBP1J3KQ70 363 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 RECQL5O94762 991 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 KDM4BO94953 1096 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 PMS2P2O95744 297 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 HSPA4LO95757 839 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 LDLRP01130 860 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 LINC00271P0C7V0 271 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF23P17027 643 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 USP8P40818 1118 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF75DP51815 510 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 CDH13P55290 713 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 LTBQ06643 244 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 ZNF234Q14588 700 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 COG2Q14746 738 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 SETMARQ53H47 684 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 TMEM211Q6ICI0 200 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 IL27RAQ6UWB1 636 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 ERN2Q76MJ5 926 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 TMEM173Q86WV6 379 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 AFAP1Q8N556 730 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 C1orf52Q8N6N3 182 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 KCNH5Q8NCM2 988 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 RDM1Q8NG50 284 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 OR6J1Q8NGC5 347 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 MOSPD2Q8NHP6 518 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 WDR20Q8TBZ3 569 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 TEKT4Q8WW24 435 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 TMED6Q8WW62 240 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 SLC44A1Q8WWI5 657 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 MIB2Q96AX9 1013 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 PRMT6Q96LA8 375 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 EGFL8Q99944 293 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 NUP85Q9BW27 656 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 WNT5BQ9H1J7 359 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 LRMDAQ9H2I8 198 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 GOLPH3LQ9H4A5 285 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 HHATLQ9HCP6 504 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 EQTNQ9NQ60 294 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 RNF7Q9UBF6 113 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 VDAC3Q9Y277 283 aa4.24□□□□□ -1.73
CDC42BPA-211ENST00000466538 MAGEA13PA6NCF6 341 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 HEPACAM2A8MVW5 462 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 MED24O75448 989 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 TADA2AO75478 443 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 HSP90AB1P08238 724 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 DANCRP0C864 163 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 SP100P23497 879 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 ITGB8P26012 769 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 HOXA11P31270 313 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 CCKBRP32239 447 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 PCGF2P35227 344 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 GNL1P36915 607 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 POLGP54098 1239 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 RALGDSQ12967 914 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 HSPB3Q12988 150 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 ALDH1L2Q3SY69 923 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 HECTD3Q5T447 861 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 GCNT6Q5T4J0 391 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 TEX38Q6PEX7 206 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 FIGLAQ6QHK4 219 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 SPATA22Q8NHS9 363 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 BBS10Q8TAM1 723 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 SLAMF9Q96A28 289 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 TMEM19Q96HH6 336 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 TTC14Q96N46 770 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 LRRC3BQ96PB8 259 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 PCYT2Q99447 389 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 NEURL2Q9BR09 285 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 NAA11Q9BSU3 229 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 OCIAD1Q9NX40 245 aa4.23□□□□□ -1.73
CDC42BPA-211ENST00000466538 NOL7Q9UMY1 257 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms