RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 WASF3Q9UPY6 502 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 MRFAP1Q9Y605 127 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 RPS6KL1Q9Y6S9 549 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 IGF2RP11717 2491 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 FAM149AA5PLN7 773 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 PRR19A6NJB7 356 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 RHPN2P1A8MT19 583 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 PPM1DO15297 605 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 TP73O15350 636 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 NUDT21O43809 227 aaKnown RBP12.16□□□□□ -0.46
CHPF2-202ENST00000465601 KCNJ13O60928 360 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 F3P13726 295 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 NSG1P42857 185 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 ARCN1P48444 511 aaKnown RBP12.16□□□□□ -0.46
CHPF2-202ENST00000465601 PRLHRP49683 370 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 DRG2P55039 364 aaKnown RBP12.16□□□□□ -0.46
CHPF2-202ENST00000465601 CCL7P80098 99 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 DMPKQ09013 629 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 TUBB2AQ13885 445 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 DNAJC21Q5F1R6 531 aaKnown RBP12.16□□□□□ -0.46
CHPF2-202ENST00000465601 HP1BP3Q5SSJ5 553 aaPredicted RBP12.16□□□□□ -0.46
CHPF2-202ENST00000465601 HES3Q5TGS1 186 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 ARMC3Q5W041 872 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 DUPD1Q68J44 220 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 KIAA0930Q6ICG6 404 aaPredicted RBP12.16□□□□□ -0.46
CHPF2-202ENST00000465601 CERS6Q6ZMG9 384 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 TMPRSS7Q7RTY8 843 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 TMEM135Q86UB9 458 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 IGDCC3Q8IVU1 814 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 CFAP206Q8IYR0 622 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 SFRP1Q8N474 314 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 LILRA3Q8N6C8 439 aaPredicted RBP12.16□□□□□ -0.46
CHPF2-202ENST00000465601 OTUD6BQ8N6M0 293 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 STAMBPL1Q96FJ0 436 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 LINC00615Q96LM1 132 aaPredicted RBP12.16□□□□□ -0.46
CHPF2-202ENST00000465601 CCM2Q9BSQ5 444 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 TUBB2BQ9BVA1 445 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 SCNM1Q9BWG6 230 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 SYNDIG1Q9H7V2 258 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 KLK13Q9UKR3 277 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 WDR37Q9Y2I8 494 aa12.16□□□□□ -0.46
CHPF2-202ENST00000465601 ZCWPW2A0A1B0GU75 182 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 OR5K4A6NMS3 321 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 SMAPO00193 183 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 B4GAT1O43505 415 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 USP1O94782 785 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 AP2A2O94973 939 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 MT-CO3P00414 261 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 POLBP06746 335 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 SLC2A4P14672 509 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 JUPP14923 745 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 BRAFP15056 766 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 PAMP19021 973 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 PPARGP37231 505 aaPredicted RBP12.15□□□□□ -0.46
CHPF2-202ENST00000465601 SLC19A1P41440 591 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 TTPAP49638 278 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 ARL4CP56559 192 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 OR1D5P58170 312 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 SLC7A5Q01650 507 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 CLCA4Q14CN2 919 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 AARS2Q5JTZ9 985 aaKnown RBP12.15□□□□□ -0.46
CHPF2-202ENST00000465601 METRNLQ641Q3 311 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 NEPROQ6NW34 567 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 ABRAXAS1Q6UWZ7 409 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 WASH2PQ6VEQ5 465 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 PACS1Q6VY07 963 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 ZNF761Q86XN6 746 aaPredicted RBP12.15□□□□□ -0.46
CHPF2-202ENST00000465601 PDIK1LQ8N165 341 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 BBOF1Q8ND07 529 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 OR2L2Q8NH16 312 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 EBNA1BP2Q99848 306 aaKnown RBP12.15□□□□□ -0.46
CHPF2-202ENST00000465601 LRRC1Q9BTT6 524 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 WASH6PQ9NQA3 447 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 WHRNQ9P202 907 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 ZNF624Q9P2J8 865 aaPredicted RBP12.15□□□□□ -0.46
CHPF2-202ENST00000465601 CPNE7Q9UBL6 633 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 PSMD13Q9UNM6 376 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 UTP11Q9Y3A2 253 aaKnown RBP12.15□□□□□ -0.46
CHPF2-202ENST00000465601 APC2O95996 2303 aa12.15□□□□□ -0.46
CHPF2-202ENST00000465601 ANKRD12Q6UB98 2062 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 KIR2DS5A0A0G2JLQ3 304 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 PRAMEF33A0A0G2JMD5 474 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 A0A0G2JNG1 304 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 C17orf113A0A1B0GUU1 675 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 OR52A4PA6NMU1 304 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 KIR2DS3K7RE56 304 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 NDUFS3O75489 264 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 RPLP0P05388 317 aaKnown RBP12.14□□□□□ -0.47
CHPF2-202ENST00000465601 PNLIPP16233 465 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 ITGB6P18564 788 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 PGAM1P18669 254 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 ALDH4A1P30038 563 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 ELK3P41970 407 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 HHEXQ03014 270 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 CALCOCO2Q13137 446 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 THOC5Q13769 683 aaKnown RBP12.14□□□□□ -0.47
CHPF2-202ENST00000465601 KIR2DS5Q14953 304 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 TRADDQ15628 312 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 HIF1AQ16665 826 aa12.14□□□□□ -0.47
CHPF2-202ENST00000465601 LONRF1Q17RB8 773 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms