RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 OSGEPL1Q9H4B0 414 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 PRDM8Q9NQV8 689 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 GRHL1Q9NZI5 618 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 WHRNQ9P202 907 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 DNAJC16Q9Y2G8 782 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 PRSS21Q9Y6M0 314 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 KIR2DS5A0A0G2JLQ3 304 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 A0A0G2JNG1 304 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 C17orf113A0A1B0GUU1 675 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 OR5K4A6NMS3 321 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 KIR2DS3K7RE56 304 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 HYAL3O43820 417 aaPredicted RBP19.96■□□□□ 0.79
SKA3-205ENST00000465471 OPA1O60313 960 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 SLC2A4P14672 509 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 PAMP19021 973 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 KIR2DS5Q14953 304 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 CCDC157Q569K6 752 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.96■□□□□ 0.79
SKA3-205ENST00000465471 CDCP2Q5VXM1 449 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 METRNLQ641Q3 311 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 TMPRSS7Q7RTY8 843 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 BBOF1Q8ND07 529 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 GPR150Q8NGU9 434 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 PWWP2AQ96N64 755 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 TTC1Q99614 292 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 EBNA1BP2Q99848 306 aaKnown RBP19.96■□□□□ 0.79
SKA3-205ENST00000465471 WDR83Q9BRX9 315 aaKnown RBP19.96■□□□□ 0.79
SKA3-205ENST00000465471 SCHIP1Q9P0W5 487 aaPredicted RBP19.96■□□□□ 0.79
SKA3-205ENST00000465471 LRIT1Q9P2V4 623 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 ANAPC5Q9UJX4 755 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 RPS6KL1Q9Y6S9 549 aa19.96■□□□□ 0.79
SKA3-205ENST00000465471 E7ESA3 106 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 QSOX1O00391 747 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 NTN3O00634 580 aaPredicted RBP19.95■□□□□ 0.78
SKA3-205ENST00000465471 OR1I1O60431 355 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 SNX2O60749 519 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 BANF1O75531 89 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 GSTM1P09488 218 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 PGAM1P18669 254 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 IDSP22304 550 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 TTPAP49638 278 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 UBE2IP63279 158 aaKnown RBP19.95■□□□□ 0.78
SKA3-205ENST00000465471 FOXK2Q01167 660 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 GSTM4Q03013 218 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 NFE2L1Q14494 772 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 TYSND1Q2T9J0 566 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 IGDCC3Q8IVU1 814 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 PDIK1LQ8N165 341 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 CACTIN-AS1Q8N1I8 211 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 MMGT1Q8N4V1 131 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 MAPK15Q8TD08 544 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 LRRC39Q96DD0 335 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 NAT9Q9BTE0 207 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 PLAC1Q9HBJ0 212 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 SARS2Q9NP81 518 aaKnown RBP19.95■□□□□ 0.78
SKA3-205ENST00000465471 MAD1L1Q9Y6D9 718 aa19.95■□□□□ 0.78
SKA3-205ENST00000465471 CASC3O15234 703 aaKnown RBP19.94■□□□□ 0.78
SKA3-205ENST00000465471 PPM1DO15297 605 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 OGNP20774 298 aaKnown RBP19.94■□□□□ 0.78
SKA3-205ENST00000465471 PBLDP30039 288 aaPredicted RBP19.94■□□□□ 0.78
SKA3-205ENST00000465471 PPARGP37231 505 aaPredicted RBP19.94■□□□□ 0.78
SKA3-205ENST00000465471 HIF1AQ16665 826 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 BBS9Q3SYG4 887 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 HES3Q5TGS1 186 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 SPRED1Q7Z699 444 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 LDB1Q86U70 411 aaPredicted RBP19.94■□□□□ 0.78
SKA3-205ENST00000465471 TMPRSS12Q86WS5 348 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 MNS1Q8NEH6 495 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 WDR48Q8TAF3 677 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 HM13Q8TCT9 377 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 CCM2Q9BSQ5 444 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 RAB17Q9H0T7 212 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 P2RY12Q9H244 342 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 DPH5Q9H2P9 285 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 WDR37Q9Y2I8 494 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 UTP11Q9Y3A2 253 aaKnown RBP19.94■□□□□ 0.78
SKA3-205ENST00000465471 TEX264Q9Y6I9 313 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 FAM169AQ9Y6X4 670 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 CEP295Q9C0D2 2601 aa19.94■□□□□ 0.78
SKA3-205ENST00000465471 PDZK1P1A8MUH7 402 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 BHMG1C9JSJ3 638 aaPredicted RBP19.93■□□□□ 0.78
SKA3-205ENST00000465471 GOLGA8KD6RF30 607 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 GOLGA8TH3BQL2 631 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 TTC4O95801 387 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 POLBP06746 335 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 XRCC1P18887 633 aaPredicted RBP19.93■□□□□ 0.78
SKA3-205ENST00000465471 RPS3P23396 243 aaKnown RBP eCLIP19.93■□□□□ 0.78
SKA3-205ENST00000465471 RPL10P27635 214 aaKnown RBP19.93■□□□□ 0.78
SKA3-205ENST00000465471 GPR3P46089 330 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 DRG2P55039 364 aaKnown RBP19.93■□□□□ 0.78
SKA3-205ENST00000465471 ARL4CP56559 192 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 CLDN6P56747 220 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 CRYMQ14894 314 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 CLCA4Q14CN2 919 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 SEPT7Q16181 437 aaKnown RBP19.93■□□□□ 0.78
SKA3-205ENST00000465471 LONRF1Q17RB8 773 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 MRNIPQ6NTE8 343 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 NEPROQ6NW34 567 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 C8orf74Q6P047 294 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 GALNT15Q8N3T1 639 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms