RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TSPYL4Q9UJ04 414 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 VPS28Q9UK41 221 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 ZNF215Q9UL58 517 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-205ENST00000464541 A0A1W2PPI3 338 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 OR2M5A3KFT3 312 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 B4DLN1 442 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 TMEM189-UBE2V1I3L0A0 370 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 PRKNO60260 465 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-205ENST00000464541 CTSVO60911 334 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 WISP2O76076 250 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 BMP10O95393 424 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 BAG4O95429 457 aaKnown RBP5.62□□□□□ -1.51
PTCD3-205ENST00000464541 SP1P08047 785 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 NR2C2P49116 596 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 MRPL12P52815 198 aaKnown RBP5.62□□□□□ -1.51
PTCD3-205ENST00000464541 EPS8Q12929 822 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 UBE2V1Q13404 147 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 KIR2DS3Q14952 304 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 PLXDC2Q6UX71 529 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 MEX3BQ6ZN04 569 aaKnown RBP5.62□□□□□ -1.51
PTCD3-205ENST00000464541 CLEC17AQ6ZS10 378 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 SZRD1Q7Z422 152 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 LONP2Q86WA8 852 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 GBGT1Q8N5D6 347 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 SPATA3Q8NHX4 192 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 ST6GAL2Q96JF0 529 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 CEP295NLQ96MC4 621 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 SDF4Q9BRK5 362 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 DNAJC18Q9H819 358 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 SDF2L1Q9HCN8 221 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 MAP3K20Q9NYL2 800 aaKnown RBP5.62□□□□□ -1.51
PTCD3-205ENST00000464541 TCF19Q9Y242 345 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 B3GALT5Q9Y2C3 310 aa5.62□□□□□ -1.51
PTCD3-205ENST00000464541 A0A087WYN8 130 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 C5orf60A6NFR6 353 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 LINC01565O15544 149 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 TFAP2AP05549 437 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 PRLRP16471 622 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 SLC15A1P46059 708 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 PNLIPRP2P54317 469 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 CHAF1BQ13112 559 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 CUL4AQ13619 759 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 USP43Q70EL4 1123 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 FASTKD5Q7L8L6 764 aaKnown RBP5.61□□□□□ -1.51
PTCD3-205ENST00000464541 PIWIL4Q7Z3Z4 852 aaKnown RBP5.61□□□□□ -1.51
PTCD3-205ENST00000464541 CIARTQ8N365 385 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-205ENST00000464541 DDOQ99489 341 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 HGH1Q9BTY7 390 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 PSD3Q9NYI0 1048 aa5.61□□□□□ -1.51
PTCD3-205ENST00000464541 FAF1Q9UNN5 650 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-205ENST00000464541 SLC22A3O75751 556 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 CSH1P0DML2 217 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 CSH2P0DML3 217 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 CXCL9Q07325 125 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 WTAPQ15007 396 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 RALBP1Q15311 655 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 DUOXA1Q1HG43 343 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 BRINP3Q76B58 766 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 MARK2Q7KZI7 788 aaKnown RBP5.6□□□□□ -1.51
PTCD3-205ENST00000464541 SLC26A9Q7LBE3 791 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 RBM15BQ8NDT2 890 aaKnown RBP5.6□□□□□ -1.51
PTCD3-205ENST00000464541 LRRC8CQ8TDW0 803 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 OXNAD1Q96HP4 312 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-205ENST00000464541 RTN4RQ9BZR6 473 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 TFB2MQ9H5Q4 396 aaKnown RBP5.6□□□□□ -1.51
PTCD3-205ENST00000464541 DENND2DQ9H6A0 471 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-205ENST00000464541 UPF2Q9HAU5 1272 aaKnown RBP5.6□□□□□ -1.51
PTCD3-205ENST00000464541 ZBTB20Q9HC78 741 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-205ENST00000464541 TBC1D29Q9UFV1 150 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 PNMA2Q9UL42 364 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 GPR34Q9UPC5 381 aa5.6□□□□□ -1.51
PTCD3-205ENST00000464541 RSF1Q96T23 1441 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-205ENST00000464541 LNP1A1A4G5 178 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 PAPSS1O43252 624 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-205ENST00000464541 LDLRP01130 860 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 PRSS1P07477 247 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 MMP9P14780 707 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 ARSEP51690 589 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 CD81P60033 236 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 PRKG2Q13237 762 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 KRTAP24-1Q3LI83 254 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 KRT79Q5XKE5 535 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 KLHDC9Q8NEP7 349 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 NR4A3Q92570 626 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 C17orf77Q96MU5 243 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 NEUROD6Q96NK8 337 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 TEX12Q9BXU0 123 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 CCDC68Q9H2F9 335 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 OSGEPL1Q9H4B0 414 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 TRPC7Q9HCX4 862 aa5.59□□□□□ -1.51
PTCD3-205ENST00000464541 LOC100509620A0A075B734 347 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 A0A1W2PQ09 198 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 PLK4O00444 970 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 RSL1D1O76021 490 aaKnown RBP5.58□□□□□ -1.52
PTCD3-205ENST00000464541 TIMP3P35625 211 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 CDKN1AP38936 164 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 MMP15P51511 669 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 DMP1Q13316 513 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-205ENST00000464541 C15orf59Q2T9L4 293 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-205ENST00000464541 RILPL1Q5EBL4 403 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms