RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TMPRSS7Q7RTY8 843 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 PDIK1LQ8N165 341 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 GALNT15Q8N3T1 639 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 OR2L2Q8NH16 312 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 SLC37A2Q8TED4 501 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 ZNF669Q96BR6 464 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 STAMBPL1Q96FJ0 436 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 FCRL3Q96P31 734 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 TRIM56Q9BRZ2 755 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 VPS37BQ9H9H4 285 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 WASH6PQ9NQA3 447 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 MARCH4Q9P2E8 410 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 RABGEF1Q9UJ41 708 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 WASF3Q9UPY6 502 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 UTP11Q9Y3A2 253 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 PIKFYVEQ9Y2I7 2098 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 KIR2DS5A0A0G2JLQ3 304 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 A0A0G2JNG1 304 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 C17orf113A0A1B0GUU1 675 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 GOLGA8KD6RF30 607 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 GOLGA8TH3BQL2 631 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 KIR2DS3K7RE56 304 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 QSOX1O00391 747 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 PPM1DO15297 605 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 TP73O15350 636 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 OR1I1O60431 355 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 POLBP06746 335 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 FASLGP48023 281 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 DRG2P55039 364 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 ARL4CP56559 192 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 CALCOCO2Q13137 446 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 NFE2L1Q14494 772 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 KIR2DS5Q14953 304 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 BBS9Q3SYG4 887 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 AGAP9Q5VTM2 703 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 METRNLQ641Q3 311 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 DUPD1Q68J44 220 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 MRNIPQ6NTE8 343 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 ABRAXAS1Q6UWZ7 409 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 FAM83HQ6ZRV2 1179 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 SDCCAG8Q86SQ7 713 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 LDB1Q86U70 411 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 SLC9B2Q86UD5 537 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 TMPRSS12Q86WS5 348 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 CFAP206Q8IYR0 622 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 OTUD6BQ8N6M0 293 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 Q8N9G6 341 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 MNS1Q8NEH6 495 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 PWWP2AQ96N64 755 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 EBNA1BP2Q99848 306 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 CCM2Q9BSQ5 444 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 NAT9Q9BTE0 207 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 SCNM1Q9BWG6 230 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 RAB17Q9H0T7 212 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 DPH5Q9H2P9 285 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 SCHIP1Q9P0W5 487 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 WHRNQ9P202 907 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 ACSL5Q9ULC5 683 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 PRSS21Q9Y6M0 314 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 PTPRBP23467 1997 aa14.25□□□□□ -0.13
SQSTM1-205ENST00000464493 ZCWPW2A0A1B0GU75 182 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 F8W8V4 182 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 ZW10O43264 779 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 BANF1O75531 89 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 GSTM1P09488 218 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 OR56A5P0C7T3 313 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 JUPP14923 745 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 BRAFP15056 766 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 PGAM1P18669 254 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 XRCC1P18887 633 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 SPINK2P20155 84 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 GPR3P46089 330 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 SHC2P98077 582 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 GSTM4Q03013 218 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 HIF1AQ16665 826 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 LONRF1Q17RB8 773 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 HES3Q5TGS1 186 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 NEPROQ6NW34 567 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 ZNF438Q7Z4V0 828 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 CCNJLQ8IV13 435 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 AVL9Q8NBF6 648 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 GPR150Q8NGU9 434 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 WDR48Q8TAF3 677 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 STN1Q9H668 368 aaKnown RBP14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 SARS2Q9NP81 518 aaKnown RBP14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 CPNE7Q9UBL6 633 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 FAM8A1Q9UBU6 413 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 ANGPTL2Q9UKU9 493 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 WDR37Q9Y2I8 494 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 FAM169AQ9Y6X4 670 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 KNTC1P50748 2209 aa14.24□□□□□ -0.13
SQSTM1-205ENST00000464493 CTAGE15A4D2H0 777 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 FAM221BA6H8Z2 402 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 PRMT5O14744 637 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 PFDN6O15212 129 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 B4GAT1O43505 415 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 NDUFS3O75489 264 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 TTC4O95801 387 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 MT-CO3P00414 261 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 FTH1P02794 183 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms