RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 NAA30Q147X3 362 aaPredicted RBP14.16□□□□□ -0.14
SMC1A-204ENST00000463684 PLEKHN1Q494U1 663 aaPredicted RBP14.16□□□□□ -0.14
SMC1A-204ENST00000463684 TXNRD3NBQ6F5E7 133 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 TRAPPC5Q8IUR0 188 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 ZNF547Q8IVP9 402 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 CPT1BQ92523 772 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 EID2BQ96D98 161 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 SGSM3Q96HU1 749 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 TTC25Q96NG3 672 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 LRFN5Q96NI6 719 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 TSGA13Q96PP4 275 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 GPR63Q9BZJ6 419 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 HAUS4Q9H6D7 363 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 SHOC2Q9UQ13 582 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 B3GNT3Q9Y2A9 372 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 WDR37Q9Y2I8 494 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 SHANK1Q9Y566 2161 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 LRRC10BA6NIK2 292 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 MEN1O00255 615 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 ZBTB11O95625 1053 aaPredicted RBP14.15□□□□□ -0.14
SMC1A-204ENST00000463684 SLC4A1P02730 911 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 POU3F2P20265 443 aaPredicted RBP14.15□□□□□ -0.14
SMC1A-204ENST00000463684 CDK18Q07002 472 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 TMEM115Q12893 351 aaPredicted RBP14.15□□□□□ -0.14
SMC1A-204ENST00000463684 GALNT3Q14435 633 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 PAFAH1B3Q15102 231 aaKnown RBP14.15□□□□□ -0.14
SMC1A-204ENST00000463684 GPR19Q15760 415 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 KYNUQ16719 465 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 VWA5B1Q5TIE3 1220 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 ARMC6Q6NXE6 501 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 TMC3Q7Z5M5 1100 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 SLC38A9Q8NBW4 561 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 CCNYQ8ND76 341 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 GDAP1Q8TB36 358 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 ZNF501Q96CX3 271 aaPredicted RBP14.15□□□□□ -0.14
SMC1A-204ENST00000463684 CLIP3Q96DZ5 547 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 FANCEQ9HB96 536 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 MAGEE1Q9HCI5 957 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 LATS2Q9NRM7 1088 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 HRASLS2Q9NWW9 162 aa14.15□□□□□ -0.14
SMC1A-204ENST00000463684 COPG1Q9Y678 874 aaKnown RBP14.15□□□□□ -0.14
SMC1A-204ENST00000463684 ZNF106Q9H2Y7 1883 aaKnown RBP14.14□□□□□ -0.15
SMC1A-204ENST00000463684 OR5K3A6NET4 321 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 F5H423 210 aaPredicted RBP14.14□□□□□ -0.15
SMC1A-204ENST00000463684 HNRNPRO43390 633 aaKnown RBP14.14□□□□□ -0.15
SMC1A-204ENST00000463684 KLHL41O60662 606 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 MMP2P08253 660 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 MX2P20592 715 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 SSR1P43307 286 aaKnown RBP14.14□□□□□ -0.15
SMC1A-204ENST00000463684 ASIC2Q16515 512 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 RPE65Q16518 533 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 PLEKHS1Q5SXH7 462 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 CCDC183Q5T5S1 534 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 LYPLAL1Q5VWZ2 237 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 NCBP2-AS2Q69YL0 99 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 LCN10Q6JVE6 187 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 ZNF571Q7Z3V5 609 aaPredicted RBP14.14□□□□□ -0.15
SMC1A-204ENST00000463684 C11orf96Q7Z7L8 435 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 AMZ2Q86W34 360 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 OOSP2Q86WS3 158 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 DSELQ8IZU8 1212 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 ZBTB2Q8N680 514 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 BRSK1Q8TDC3 778 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 XPO4Q9C0E2 1151 aaKnown RBP14.14□□□□□ -0.15
SMC1A-204ENST00000463684 ILKAPQ9H0C8 392 aaPredicted RBP14.14□□□□□ -0.15
SMC1A-204ENST00000463684 SOHLH2Q9NX45 425 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 NFKBIL1Q9UBC1 381 aaPredicted RBP14.14□□□□□ -0.15
SMC1A-204ENST00000463684 IP6K2Q9UHH9 426 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 PSMD13Q9UNM6 376 aa14.14□□□□□ -0.15
SMC1A-204ENST00000463684 LRRC53A6NM62 1247 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 ALPPP05187 535 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 CD48P09326 243 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 PIRTP0C851 137 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 SLC25A11Q02978 314 aaKnown RBP14.13□□□□□ -0.15
SMC1A-204ENST00000463684 ATP1A4Q13733 1029 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 HADHQ16836 314 aaKnown RBP14.13□□□□□ -0.15
SMC1A-204ENST00000463684 KHDC1Q4VXA5 237 aaKnown RBP14.13□□□□□ -0.15
SMC1A-204ENST00000463684 FAM69BQ5VUD6 431 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 CCDC70Q6NSX1 233 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 RAB43Q86YS6 212 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 CARFQ8N187 725 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 KCTD6Q8NC69 237 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 GPR150Q8NGU9 434 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 LRRN4Q8WUT4 740 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 MARVELD3Q96A59 401 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 VPS35Q96QK1 796 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 RANBP9Q96S59 729 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 SLC7A5P2Q9GIP4 190 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 ZNF711Q9Y462 761 aa14.13□□□□□ -0.15
SMC1A-204ENST00000463684 DOPEY1Q5JWR5 2465 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 DDX3XO00571 662 aaKnown RBP eCLIP14.12□□□□□ -0.159e-54■■■■■ 35.8
SMC1A-204ENST00000463684 POP7O75817 140 aaKnown RBP14.12□□□□□ -0.15
SMC1A-204ENST00000463684 BPIP17213 487 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 GLRBP48167 497 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 PER3P56645 1201 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 ADCY2Q08462 1091 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 KLHL30Q0D2K2 578 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 XRCC4Q13426 336 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 PRAMEF17Q5VTA0 474 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 HGSNATQ68CP4 663 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms