RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 HALP42357 657 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 ARCN1P48444 511 aaKnown RBP19.47■□□□□ 0.71
COL9A3-204ENST00000463487 KIR2DS5Q14953 304 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 MSS51Q4VC12 460 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 GPR156Q8NFN8 814 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 OR2L2Q8NH16 312 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 HM13Q8TCT9 377 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 MAPK15Q8TD08 544 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 PYROXD1Q8WU10 500 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 FCRL3Q96P31 734 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-204ENST00000463487 CCM2Q9BSQ5 444 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 EPB41L5Q9HCM4 733 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 INTS10Q9NVR2 710 aaKnown RBP19.47■□□□□ 0.71
COL9A3-204ENST00000463487 MTRF1LQ9UGC7 380 aaKnown RBP19.47■□□□□ 0.71
COL9A3-204ENST00000463487 GNPTGQ9UJJ9 305 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 PLEKHM1Q9Y4G2 1056 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 TEX264Q9Y6I9 313 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 ARID1BQ8NFD5 2236 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-204ENST00000463487 PCNX2A6NKB5 2137 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 DMXL1Q9Y485 3027 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 UBA6A0AVT1 1052 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-204ENST00000463487 CPED1A4D0V7 1026 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 EME2A4GXA9 379 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-204ENST00000463487 E7ESA3 106 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 GIPC1O14908 333 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 TP73O15350 636 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 FTH1P19P0C7X4 201 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 F3P13726 295 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 ACADVLP49748 655 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 E2F1Q01094 437 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 DNAJC3Q13217 504 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 CCDC157Q569K6 752 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 ZNF470Q6ECI4 717 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 C11orf96Q7Z7L8 435 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 KCNMB4Q86W47 210 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 ZBED8Q8IZ13 594 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 AGGF1Q8N302 714 aaeCLIP19.46■□□□□ 0.71
COL9A3-204ENST00000463487 CLDN19Q8N6F1 224 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 FBXO25Q8TCJ0 367 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 SEC14L1Q92503 715 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 CFAP36Q96G28 342 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 L2HGDHQ9H9P8 463 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 MARCH4Q9P2E8 410 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-204ENST00000463487 TBC1D29Q9UFV1 150 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 SLC23A2Q9UGH3 650 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 ACSL5Q9ULC5 683 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 PCDHB1Q9Y5F3 818 aa19.46■□□□□ 0.71
COL9A3-204ENST00000463487 ZFC3H1O60293 1989 aaKnown RBP19.45■□□□□ 0.7
COL9A3-204ENST00000463487 RHPN2P1A8MT19 583 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 GOLGA8KD6RF30 607 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 H3BMM5 538 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 GOLGA8TH3BQL2 631 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 NUDT21O43809 227 aaKnown RBP19.45■□□□□ 0.7
COL9A3-204ENST00000463487 NOBOXO60393 691 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 BANF1O75531 89 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 GLB1P16278 677 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 PLOD1Q02809 727 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-204ENST00000463487 CBLBQ13191 982 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 TYSND1Q2T9J0 566 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 AGAP9Q5VTM2 703 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 PTRHD1Q6GMV3 140 aaKnown RBP19.45■□□□□ 0.7
COL9A3-204ENST00000463487 WASH2PQ6VEQ5 465 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 EFL1Q7Z2Z2 1120 aaKnown RBP19.45■□□□□ 0.7
COL9A3-204ENST00000463487 SLC9B2Q86UD5 537 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 CILP2Q8IUL8 1156 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 TRIM48Q8IWZ4 208 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 FBXO36Q8NEA4 188 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 IFI44Q8TCB0 444 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 SH3KBP1Q96B97 665 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 PWWP2AQ96N64 755 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 PANX3Q96QZ0 392 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 TRIM56Q9BRZ2 755 aaKnown RBP19.45■□□□□ 0.7
COL9A3-204ENST00000463487 SAYSD1Q9NPB0 183 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 PPANQ9NQ55 473 aaKnown RBP19.45■□□□□ 0.7
COL9A3-204ENST00000463487 WASH6PQ9NQA3 447 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 ST14Q9Y5Y6 855 aa19.45■□□□□ 0.7
COL9A3-204ENST00000463487 ESYT3A0FGR9 886 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 SLC35G4P0C7Q5 338 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 PNLIPP16233 465 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 HLTFQ14527 1009 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL9A3-204ENST00000463487 SEMA3AQ14563 771 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 SEPT7Q16181 437 aaKnown RBP19.44■□□□□ 0.7
COL9A3-204ENST00000463487 SYTL3Q4VX76 610 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 HP1BP3Q5SSJ5 553 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-204ENST00000463487 GUSBP11Q6P575 273 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 IYDQ6PHW0 289 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 UNC5AQ6ZN44 842 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 CCDC25Q86WR0 208 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 ANKMY2Q8IV38 441 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 PALM2Q8IXS6 379 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 NAGSQ8N159 534 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 SFRP1Q8N474 314 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 WDR48Q8TAF3 677 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 CERS2Q96G23 380 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 ABCG4Q9H172 646 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 CCDC68Q9H2F9 335 aa19.44■□□□□ 0.7
COL9A3-204ENST00000463487 GOLGA4Q13439 2230 aaKnown RBP19.43■□□□□ 0.7
COL9A3-204ENST00000463487 DNAH14Q0VDD8 3507 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 LY6G6EA0A0G2JKS1 128 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 LIN7AO14910 233 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms