RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 Q8N9G6 341 aaPredicted RBP12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 HM13Q8TCT9 377 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 ZFPM2Q8WW38 1151 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 CCM2Q9BSQ5 444 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 SYNDIG1Q9H7V2 258 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 PRDM8Q9NQV8 689 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 IGHV1OR21-1A0A087WYE8 117 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 CCDC162PA2VCL2 907 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 PDZK1P1A8MUH7 402 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 DUX1O43812 170 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 NSG1P42857 185 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 PDX1P52945 283 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 MAP9Q49MG5 647 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 FNBP1LQ5T0N5 605 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 TAS2R42Q7RTR8 314 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 PROSER1Q86XN7 944 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 TRIM48Q8IWZ4 208 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 OR4D9Q8NGE8 314 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 ZNF578Q96N58 590 aaPredicted RBP12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 KIFC1Q9BW19 673 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 B3GNT4Q9C0J1 378 aa12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 PIH1D1Q9NWS0 290 aaKnown RBP12.83□□□□□ -0.36
R3HDM1-213ENST00000463230 CCDC188H7C350 402 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 HGSO14964 777 aaPredicted RBP12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 ZNF185O15231 689 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 SGTAO43765 313 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 CD1CP29017 333 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 PAFAH1B1P43034 410 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 ARSDP51689 593 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 OR1D5P58170 312 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 ERVPABLB-1P60509 514 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 PRAMEP78395 509 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 RPA4Q13156 261 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 DBN1Q16643 649 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 CCDC38Q502W7 563 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 ZNF449Q6P9G9 518 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 WDR74Q6RFH5 385 aaPredicted RBP12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 MARCH9Q86YJ5 346 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 SLITRK4Q8IW52 837 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 HDAC10Q969S8 669 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 TREX1Q9NSU2 369 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 AKAP7Q9P0M2 348 aaPredicted RBP12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 PCDHB1Q9Y5F3 818 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 AK5Q9Y6K8 562 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 CHD8Q9HCK8 2581 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 MAGEB16A2A368 324 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 OR2AG2A6NM03 316 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 VIPP01282 170 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 ALDH4A1P30038 563 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 SESN2P58004 480 aaPredicted RBP12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 PTK6Q13882 451 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 ZNF534Q76KX8 674 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 PCGF5Q86SE9 256 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 CREG2Q8IUH2 290 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 PARP9Q8IXQ6 854 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 OR4L1Q8NH43 312 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 CPT1BQ92523 772 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 CXorf40BQ96DE9 158 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 SGF29Q96ES7 293 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 ATXN7L3BQ96GX2 97 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 FAM96AQ9H5X1 160 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 PDP2Q9P2J9 529 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 SOX13Q9UN79 622 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 HEBP2Q9Y5Z4 205 aa12.82□□□□□ -0.36
R3HDM1-213ENST00000463230 SMAPO00193 183 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 CCL22O00626 93 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 GOT2P00505 430 aaKnown RBP12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 FTH1P02794 183 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 SLC19A1P41440 591 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 GABREP78334 506 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 PLOD1Q02809 727 aaPredicted RBP12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 CYP4F3Q08477 520 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 PPP1R7Q15435 360 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 TRIP13Q15645 432 aaPredicted RBP12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 TBC1D25Q3MII6 688 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 TMEM26Q6ZUK4 368 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 PPIL6Q8IXY8 311 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 PIANPQ8IYJ0 282 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 SNIP1Q8TAD8 396 aaKnown RBP12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 AHCYL2Q96HN2 611 aaKnown RBP12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 SMARCAL1Q9NZC9 954 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 ZNF624Q9P2J8 865 aaPredicted RBP12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 ZMIZ1Q9ULJ6 1067 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 UNC13CQ8NB66 2214 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 NDC80O14777 642 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 BRAFP15056 766 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 PAMP19021 973 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 NDUFS1P28331 727 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 CD151P48509 253 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 LIMK2P53671 638 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 FASTKD1Q53R41 847 aaKnown RBP12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 TMEM71Q6P5X7 295 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 DET1Q7L5Y6 550 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 HOOK3Q86VS8 718 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 TSSK1BQ9BXA7 367 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 EPB41L5Q9HCM4 733 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 SLC40A1Q9NP59 571 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 THSD1Q9NS62 852 aa12.81□□□□□ -0.36
R3HDM1-213ENST00000463230 SCHIP1Q9P0W5 487 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms