RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 HCAR3P49019 387 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 POU4F2Q12837 409 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ATP1A4Q13733 1029 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ZNF235Q14590 738 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 NAA30Q147X3 362 aaPredicted RBP7.55□□□□□ -1.2
SMC3-202ENST00000462899 TLR1Q15399 786 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 CLEC16AQ2KHT3 1053 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ZXDCQ2QGD7 858 aaPredicted RBP7.55□□□□□ -1.2
SMC3-202ENST00000462899 VWA3BQ502W6 1294 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ZNF789Q5FWF6 425 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 PLEKHS1Q5SXH7 462 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 AGAP9Q5VTM2 703 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ZNF385CQ66K41 422 aaPredicted RBP7.55□□□□□ -1.2
SMC3-202ENST00000462899 WASH2PQ6VEQ5 465 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 SPNS3Q6ZMD2 512 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 C11orf96Q7Z7L8 435 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 KCNMB4Q86W47 210 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 KMT5CQ86Y97 462 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 PHYKPLQ8IUZ5 450 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ZNF547Q8IVP9 402 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 RBM12BQ8IXT5 1001 aaKnown RBP7.55□□□□□ -1.2
SMC3-202ENST00000462899 TEX26Q8N6G2 289 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 UBXN4Q92575 508 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 EID2BQ96D98 161 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ZDHHC12Q96GR4 267 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 NLNQ9BYT8 704 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 VPS16Q9H269 839 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ZNF552Q9H707 407 aaPredicted RBP7.55□□□□□ -1.2
SMC3-202ENST00000462899 FGF21Q9NSA1 209 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 KLC4Q9NSK0 619 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ETNK2Q9NVF9 386 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 DTLQ9NZJ0 730 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ADAM22Q9P0K1 906 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 SIK3Q9Y2K2 1263 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 CPAMD8Q8IZJ3 1885 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ACANP16112 2415 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 OR52A4PA6NMU1 304 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 TMEM229AB2RXF0 380 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 GPR89AB7ZAQ6 455 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 EPHB6O15197 1021 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 SCRG1O75711 98 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 GFPT2O94808 682 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 CLDN7O95471 211 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 VIPP01282 170 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 CALB1P05937 261 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 STSP08842 583 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 GPR89BP0CG08 455 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 AMD1P17707 334 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 CA5AP35218 305 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 MTIF2P46199 727 aaKnown RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 NSFP46459 744 aaKnown RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 SPINT3P49223 89 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 RRADP55042 308 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 SOX8P57073 446 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 TUBB4BP68371 445 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 ACY1Q03154 408 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 CDK18Q07002 472 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 ABRQ12979 859 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 TUBB2AQ13885 445 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 ANO6Q4KMQ2 910 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 ERMARDQ5T6L9 678 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 PRAMEF17Q5VTA0 474 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 IRGCQ6NXR0 463 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 DNAJC24Q6P3W2 148 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 SPOCD1Q6ZMY3 1216 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 ADGRG6Q86SQ4 1221 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 PAF1Q8N7H5 531 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 SIDT2Q8NBJ9 832 aaKnown RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
SMC3-202ENST00000462899 GPR150Q8NGU9 434 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 MR1Q95460 341 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 MAP3K3Q99759 626 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 TIMM29Q9BSF4 260 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 TUBGCP2Q9BSJ2 902 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 TUBB2BQ9BVA1 445 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 TDRD1Q9BXT4 1180 aaKnown RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 TRIM8Q9BZR9 551 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 DHX35Q9H5Z1 703 aaKnown RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 ZBTB20Q9HC78 741 aaPredicted RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 CWC15Q9P013 229 aaKnown RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 TMEM63CQ9P1W3 806 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 NFKBIL1Q9UBC1 381 aaPredicted RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 DNPEPQ9ULA0 475 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 SNX7Q9UNH6 387 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 BTRCQ9Y297 605 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 WDR37Q9Y2I8 494 aa7.54□□□□□ -1.2
SMC3-202ENST00000462899 KLF2Q9Y5W3 355 aaPredicted RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 COPG1Q9Y678 874 aaKnown RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 NSD1Q96L73 2696 aaPredicted RBP7.54□□□□□ -1.2
SMC3-202ENST00000462899 RGSL1A5PLK6 1076 aa7.53□□□□□ -1.2
SMC3-202ENST00000462899 TLCD2A6NGC4 264 aa7.53□□□□□ -1.2
SMC3-202ENST00000462899 A6NL46 340 aa7.53□□□□□ -1.2
SMC3-202ENST00000462899 PRSS44E7EML9 344 aa7.53□□□□□ -1.2
SMC3-202ENST00000462899 KLF7O75840 302 aaPredicted RBP7.53□□□□□ -1.2
SMC3-202ENST00000462899 MSL3P1P0C860 447 aa7.53□□□□□ -1.2
SMC3-202ENST00000462899 ZNF7P17097 686 aaPredicted RBP7.53□□□□□ -1.2
SMC3-202ENST00000462899 SOX5P35711 763 aa7.53□□□□□ -1.2
SMC3-202ENST00000462899 MMP13P45452 471 aa7.53□□□□□ -1.2
SMC3-202ENST00000462899 ZNF135P52742 658 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms