RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 TLK2Q86UE8 772 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 DIS3L2Q8IYB7 885 aaKnown RBP4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 CCDC105Q8IYK2 499 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 FAM133AQ8N9E0 248 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 SCCPDHQ8NBX0 429 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 BEST2Q8NFU1 509 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 CADM4Q8NFZ8 388 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 THOC3Q96J01 351 aaKnown RBP4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 TTC14Q96N46 770 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 ZNF570Q96NI8 536 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 MTG1Q9BT17 334 aaPredicted RBP4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 KRTAP17-1Q9BYP8 105 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 NUF2Q9BZD4 464 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 FTOQ9C0B1 505 aaKnown RBP eCLIP4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 MAGEE1Q9HCI5 957 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 BPIFA1Q9NP55 256 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 ASAH2Q9NR71 780 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 SELENONQ9NZV5 590 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 CTNNAL1Q9UBT7 734 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 CTNNA3Q9UI47 895 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 STX8Q9UNK0 236 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 TRIOBPQ9H2D6 2365 aa4.47□□□□□ -1.69
PRPF4B-202ENST00000461612 TTC41PQ6P2S7 1318 aa4.46□□□□□ -1.69
PRPF4B-202ENST00000461612 DOCK1Q14185 1865 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 F5H0A9 414 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 GPAA1O43292 621 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 ICAM1P05362 532 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 T-ENOLP0DO92 83 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 DDX5P17844 614 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 CASTP20810 708 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 MXI1P50539 228 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 CCR9P51686 369 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 GEMIN4P57678 1058 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 IRX6P78412 446 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 BEX3Q00994 111 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 CNTN2Q02246 1040 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 LTBQ06643 244 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 GRIK3Q13003 919 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 FAAH2Q6GMR7 532 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 PLEKHA7Q6IQ23 1121 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 CXCL17Q6UXB2 119 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 CRELD2Q6UXH1 353 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 SHFQ7M4L6 423 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 DHX40Q8IX18 779 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 CLIP4Q8N3C7 705 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 ETNPPLQ8TBG4 499 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 ARRDC2Q8TBH0 407 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 METTL6Q8TCB7 284 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 SCFD2Q8WU76 684 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 ADAMTS14Q8WXS8 1223 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 SKA1Q96BD8 255 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 FAM149B1Q96BN6 582 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 MAP7D2Q96T17 732 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 ZPBPQ9BS86 351 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 ALDH8A1Q9H2A2 487 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 HIPK2Q9H2X6 1198 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 DCTPP1Q9H773 170 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 TCP11L1Q9NUJ3 509 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 CYP39A1Q9NYL5 469 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 HAO1Q9UJM8 370 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 FBXO2Q9UK22 296 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 CCPG1Q9ULG6 757 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 LSM4Q9Y4Z0 139 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 BRCA2P51587 3418 aa4.46□□□□□ -1.7
PRPF4B-202ENST00000461612 AK9Q5TCS8 1911 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 A0A0U1RQJ8 604 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 DYTNA2CJ06 578 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 NPIPB15A6NHN6 443 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 LACTBL1A8MY62 500 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 RANBP6O60518 1105 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 KCNJ13O60928 360 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 PRDM1O75626 825 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 GAGE7O76087 117 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 NGFRP08138 427 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 GAGE12FP0CL80 117 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 GAGE12GP0CL81 117 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 GAGE12IP0CL82 117 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 TOP1P11387 765 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 EDN2P20800 178 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 C21orf33P30042 268 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 BSGP35613 385 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 HARS2P49590 506 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 NANOS2P60321 138 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 GAGE1Q13065 139 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 GAGE4Q13068 117 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 OLIG2Q13516 323 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 CCDC96Q2M329 555 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 SGO1Q5FBB7 561 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 PPP6R3Q5H9R7 873 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 TMEM31Q5JXX7 168 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 GPATCH4Q5T3I0 446 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 TYW3Q6IPR3 259 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 LRRC8EQ6NSJ5 796 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 KRBA2Q6ZNG9 492 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 TMTC3Q6ZXV5 915 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 GLCCI1Q86VQ1 547 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 OR6J1Q8NGC5 347 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 AFAP1L1Q8TED9 768 aa4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 HDAC2Q92769 488 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-202ENST00000461612 TXNDC15Q96J42 360 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms