RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 TMEM74Q96NL1 305 aa10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 TMEM121BQ9BXQ6 578 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 STRADBQ9C0K7 418 aa10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 NRSN2Q9GZP1 204 aa10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 VPS37BQ9H9H4 285 aa10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 MRM3Q9HC36 420 aaKnown RBP10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 XAB2Q9HCS7 855 aaKnown RBP10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 WASH6PQ9NQA3 447 aa10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 CATSPERZQ9NTU4 200 aa10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 SAMD15Q9P1V8 674 aa10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 FAM8A1Q9UBU6 413 aa10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 PCDHB1Q9Y5F3 818 aa10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 ENTPD2Q9Y5L3 495 aa10.4□□□□□ -0.74
TRAPPC12-213ENST00000461577 COL27A1Q8IZC6 1860 aaPredicted RBP10.4□□□□□ -0.75
TRAPPC12-213ENST00000461577 KNTC1P50748 2209 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 IGLV3-16A0A075B6K0 115 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 SDR42E2A6NKP2 422 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 GOLGA8MH3BSY2 632 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 QSOX1O00391 747 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 DNALI1O14645 258 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 DUX1O43812 170 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 AVILO75366 819 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 AP2A2O94973 939 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 CPNE6O95741 557 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 MLNP12872 115 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 XRCC1P18887 633 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 NMBRP28336 390 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 SLC19A1P41440 591 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 NSG1P42857 185 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 PTGIRP43119 386 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 MAPK9P45984 424 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 PRLHRP49683 370 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 UBE2IP63279 158 aaKnown RBP10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 GPLD1P80108 840 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 DR1Q01658 176 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 ACVR1Q04771 509 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 CYP4F3Q08477 520 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 CLPPQ16740 277 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 AARS2Q5JTZ9 985 aaKnown RBP10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 ZNF449Q6P9G9 518 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 ABRAXAS1Q6UWZ7 409 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 CERS6Q6ZMG9 384 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 FAM83HQ6ZRV2 1179 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 USP53Q70EK8 1073 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 PIM3Q86V86 326 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 CAND1Q86VP6 1230 aaKnown RBP10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 CFAP206Q8IYR0 622 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 OTUD6BQ8N6M0 293 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 OR10G6Q8NH81 332 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 MDM1Q8TC05 714 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 HM13Q8TCT9 377 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 SLCO2A1Q92959 643 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 CCDC97Q96F63 343 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 ATXN7L3BQ96GX2 97 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 LINC00615Q96LM1 132 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 DPYSL5Q9BPU6 564 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 CCM2Q9BSQ5 444 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 KIFC1Q9BW19 673 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 FOXP3Q9BZS1 431 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 EPB41L5Q9HCM4 733 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 SCHIP1Q9P0W5 487 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 ACSL5Q9ULC5 683 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 SOX13Q9UN79 622 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 PSMD13Q9UNM6 376 aa10.39□□□□□ -0.75
TRAPPC12-213ENST00000461577 PIKFYVEQ9Y2I7 2098 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 SPEGQ15772 3267 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 IGHV1OR21-1A0A087WYE8 117 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 CCDC187A0A096LP49 1063 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 C17orf113A0A1B0GUU1 675 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 MAGEB16A2A368 324 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 PRR19A6NJB7 356 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 OR52A4PA6NMU1 304 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 FANCGO15287 622 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 CD3EAPO15446 510 aaKnown RBP10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 SGTAO43765 313 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 FTH1P02794 183 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 POLBP06746 335 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 GSTM1P09488 218 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 SLC35G4P0C7Q5 338 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 OR56A5P0C7T3 313 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 BRAFP15056 766 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 PAMP19021 973 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 CD1CP29017 333 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 EPHA4P54764 986 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 GABREP78334 506 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 GSTM4Q03013 218 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 CLCA4Q14CN2 919 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 RTP5Q14D33 572 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 RPE65Q16518 533 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 C3orf38Q5JPI3 329 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 PHF19Q5T6S3 580 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 RNASEH2BQ5TBB1 312 aaKnown RBP10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 NKAIN2Q5VXU1 208 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 IZUMO3Q5VZ72 239 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 ARMC3Q5W041 872 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 METRNLQ641Q3 311 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 FOXR1Q6PIV2 292 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 CES3Q6UWW8 571 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 PACS1Q6VY07 963 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms