RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SLC22A12Q96S37 553 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 CDK5RAP1Q96SZ6 601 aaKnown RBP15.24■□□□□ 0.03
LMNB1-203ENST00000460265 ERVK-6Q9BXR3 956 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 WWOXQ9NZC7 414 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 PRPF19Q9UMS4 504 aaKnown RBP15.24■□□□□ 0.03
LMNB1-203ENST00000460265 CARD8Q9Y2G2 431 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 FAM47E-STBD1D6RA91 191 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 ECI2O75521 394 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 OR4F21O95013 312 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 HOXC13P31276 330 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 ALDH3B2P48448 385 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 POLD2P49005 469 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 BMXP51813 675 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 DIO3P55073 304 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 TIGD2Q4W5G0 525 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 UNC50Q53HI1 259 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 PERM1Q5SV97 790 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 RETSATQ6NUM9 610 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 ZNF549Q6P9A3 640 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 LYSMD3Q7Z3D4 306 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 DHFR2Q86XF0 187 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 SCML4Q8N228 414 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 ZNF461Q8TAF7 563 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 CHPT1Q8WUD6 406 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 BCL7CQ8WUZ0 217 aaPredicted RBP15.24■□□□□ 0.03
LMNB1-203ENST00000460265 WBP2Q969T9 261 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 PBXIP1Q96AQ6 731 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 SPATA17Q96L03 361 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 CIB1Q99828 191 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 CLK4Q9HAZ1 481 aaKnown RBP15.24■□□□□ 0.03
LMNB1-203ENST00000460265 SPAG4Q9NPE6 437 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 GMPR2Q9P2T1 348 aaKnown RBP15.24■□□□□ 0.03
LMNB1-203ENST00000460265 NEU3Q9UQ49 428 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 YIPF1Q9Y548 306 aa15.24■□□□□ 0.03
LMNB1-203ENST00000460265 KPNA4O00629 521 aaPredicted RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 ATE1O95260 518 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 RPL10P27635 214 aaKnown RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 MAP4P27816 1152 aaKnown RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 CSKP41240 450 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 TTPAP49638 278 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 CAMK2BQ13554 666 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 IL23RQ5VWK5 629 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 ZFP1Q6P2D0 407 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 CNTN4Q8IWV2 1026 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 IQCF2Q8IXL9 164 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 PDZD8Q8NEN9 1154 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 ZNF558Q96NG5 402 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 PSKH2Q96QS6 385 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 CIPCQ9C0C6 399 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 NOL11Q9H8H0 719 aaKnown RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 CXorf21Q9HAI6 301 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 TRIM38O00635 465 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 CDK14O94921 469 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 PEX11BO96011 259 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 CNPP09543 421 aaKnown RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 CD1DP15813 335 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 HSPA14Q0VDF9 509 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 MTX3Q5HYI7 312 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 MDGA1Q8NFP4 955 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 ZNF296Q8WUU4 475 aaPredicted RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 AARSD1Q9BTE6 412 aaKnown RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 SIAEQ9HAT2 523 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 ZFP14Q9HCL3 533 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 PNPLA3Q9NST1 481 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 RNF11Q9Y3C5 154 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 KRBA1A5PL33 1030 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 A8MU76 341 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 AQP9O43315 295 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 PRDX3P30048 256 aaKnown RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 GDF5P43026 501 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 TPD52P55327 224 aaPredicted RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 FGD3Q5JSP0 725 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 TTC33Q6PID6 262 aaPredicted RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 ZBTB49Q6ZSB9 765 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 SPPL2CQ8IUH8 684 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 LILRA2Q8N149 483 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 TMEM151AQ8N4L1 468 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 ISL2Q96A47 359 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 MRM3Q9HC36 420 aaKnown RBP15.23■□□□□ 0.03
LMNB1-203ENST00000460265 CFAP97Q9P2B7 532 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 DNAJC15Q9Y5T4 150 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 SCN10AQ9Y5Y9 1956 aa15.23■□□□□ 0.03
LMNB1-203ENST00000460265 A0A087WXM4 84 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 SOBPA7XYQ1 873 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 H3BNH8 94 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 SLC2A4P14672 509 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 NR4A1P22736 598 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 CST5P28325 142 aaPredicted RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 RECQLP46063 649 aaPredicted RBP15.22■□□□□ 0.03
LMNB1-203ENST00000460265 IL1RL1Q01638 556 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 SF3B4Q15427 424 aaKnown RBP eCLIP15.22■□□□□ 0.031e-9■■■■□ 23.6
LMNB1-203ENST00000460265 ZBED5Q49AG3 693 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 MILR1Q7Z6M3 343 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 NAT16Q8N8M0 369 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 FAM47BQ8NA70 645 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 LRTOMTQ8WZ04 291 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 ARNT2Q9HBZ2 717 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 GNPTGQ9UJJ9 305 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 PRELID1Q9Y255 219 aa15.22■□□□□ 0.03
LMNB1-203ENST00000460265 PRAMEF1O95521 474 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms