RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 DOK6Q6PKX4 331 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 TRMT10CQ7L0Y3 403 aaKnown RBP15.4■□□□□ 0.06
SDF4-204ENST00000459994 ANKMY2Q8IV38 441 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 SPACA3Q8IXA5 215 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 NRSN1Q8IZ57 195 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 Q8N9G6 341 aaPredicted RBP15.4■□□□□ 0.06
SDF4-204ENST00000459994 OR4K2Q8NGD2 314 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 DTX3LQ8TDB6 740 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 CAVIN3Q969G5 261 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 C9orf72Q96LT7 481 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 TTC25Q96NG3 672 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 PRORYQ9H606 182 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 RAD18Q9NS91 495 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 KCTD5Q9NXV2 234 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 PKD2L2Q9NZM6 624 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 NFKBIL1Q9UBC1 381 aaPredicted RBP15.4■□□□□ 0.06
SDF4-204ENST00000459994 TMEM98Q9Y2Y6 226 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 PKP3Q9Y446 797 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 RPS6KL1Q9Y6S9 549 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 FAM169AQ9Y6X4 670 aa15.4■□□□□ 0.06
SDF4-204ENST00000459994 ZCWPW2A0A1B0GU75 182 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 H7C0S8 307 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 ERLIN1O75477 346 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 SPAG6O75602 509 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 TCEA3O75764 348 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 DXOO77932 396 aaKnown RBP15.39■□□□□ 0.05
SDF4-204ENST00000459994 NMBRP28336 390 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 HADHAP40939 763 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 TLE3Q04726 772 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 HP1BP3Q5SSJ5 553 aaPredicted RBP15.39■□□□□ 0.05
SDF4-204ENST00000459994 KIAA0930Q6ICG6 404 aaPredicted RBP15.39■□□□□ 0.05
SDF4-204ENST00000459994 UNC5AQ6ZN44 842 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 NLRP8Q86W28 1048 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 PALM2Q8IXS6 379 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 OR13J1Q8NGT2 312 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 GPBAR1Q8TDU6 330 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 SCG3Q8WXD2 468 aaKnown RBP15.39■□□□□ 0.05
SDF4-204ENST00000459994 ZNF669Q96BR6 464 aaPredicted RBP15.39■□□□□ 0.05
SDF4-204ENST00000459994 MFSD3Q96ES6 412 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 DNAJC1Q96KC8 554 aaKnown RBP15.39■□□□□ 0.05
SDF4-204ENST00000459994 ZNF778Q96MU6 729 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 FCRL3Q96P31 734 aaPredicted RBP15.39■□□□□ 0.05
SDF4-204ENST00000459994 CDC42EP4Q9H3Q1 356 aaKnown RBP15.39■□□□□ 0.05
SDF4-204ENST00000459994 LRRN3Q9H3W5 708 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 DPEP2Q9H4A9 486 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 PLAC1Q9HBJ0 212 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 PHPT1Q9NRX4 125 aaPredicted RBP15.39■□□□□ 0.05
SDF4-204ENST00000459994 NINJ2Q9NZG7 142 aa15.39■□□□□ 0.05
SDF4-204ENST00000459994 D6RAR5 112 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 INPP4BO15327 924 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 BUD23O43709 281 aaKnown RBP15.38■□□□□ 0.05
SDF4-204ENST00000459994 HGFP14210 728 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 BPIP17213 487 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 PAMP19021 973 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 KELP23276 732 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 GPR1P46091 355 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 PMS2P54278 862 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 DCDC1P59894 354 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 DPTQ07507 201 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 PTPRCAPQ14761 206 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 CRYMQ14894 314 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 KYNUQ16719 465 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 C14orf28Q4W4Y0 310 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 CES3Q6UWW8 571 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 LRRC69Q6ZNQ3 347 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 CYS1Q717R9 158 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 ZNF765Q7L2R6 523 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.38■□□□□ 0.05
SDF4-204ENST00000459994 OR13C4Q8NGS5 318 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 AP2M1Q96CW1 435 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 CFAP36Q96G28 342 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 CDKN2AIPNLQ96HQ2 116 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 SGSM3Q96HU1 749 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 ZNF578Q96N58 590 aaPredicted RBP15.38■□□□□ 0.05
SDF4-204ENST00000459994 SLC46A1Q96NT5 459 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 PLEKHG4BQ96PX9 1271 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 GFM1Q96RP9 751 aaKnown RBP15.38■□□□□ 0.05
SDF4-204ENST00000459994 RIOK2Q9BVS4 552 aaKnown RBP15.38■□□□□ 0.05
SDF4-204ENST00000459994 LRRC4CQ9HCJ2 640 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 TAAR2Q9P1P5 351 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 SLC2A6Q9UGQ3 507 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 SLC17A4Q9Y2C5 497 aa15.38■□□□□ 0.05
SDF4-204ENST00000459994 OAS3Q9Y6K5 1087 aaKnown RBP15.38■□□□□ 0.05
SDF4-204ENST00000459994 CCDC78A2IDD5 438 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 FADS2P1A8MWK0 482 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 CDRT15L2A8MXV6 281 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 RRP8O43159 456 aaKnown RBP15.37■□□□□ 0.05
SDF4-204ENST00000459994 SLC4A1P02730 911 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 SPAM1P38567 509 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 ARCN1P48444 511 aaKnown RBP15.37■□□□□ 0.05
SDF4-204ENST00000459994 ARSDP51689 593 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 PCBP4P57723 403 aaKnown RBP15.37■□□□□ 0.05
SDF4-204ENST00000459994 GPX6P59796 221 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 CTBSQ01459 385 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 COL9A2Q14055 689 aaPredicted RBP15.37■□□□□ 0.05
SDF4-204ENST00000459994 ZNF449Q6P9G9 518 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 SLC30A9Q6PML9 568 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 MARK2Q7KZI7 788 aaKnown RBP15.37■□□□□ 0.05
SDF4-204ENST00000459994 SPRED1Q7Z699 444 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 C17orf82Q86X59 251 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms