RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 DRG2P55039 364 aaKnown RBP12.61□□□□□ -0.39
COL18A1-206ENST00000459895 MPP1Q00013 466 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 DMPKQ09013 629 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 HLTFQ14527 1009 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL18A1-206ENST00000459895 NR0B2Q15466 257 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 ZNF658BQ4V348 819 aaPredicted RBP12.61□□□□□ -0.39
COL18A1-206ENST00000459895 C14orf28Q4W4Y0 310 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 CTSL3PQ5NE16 218 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 TRMT10BQ6PF06 316 aaKnown RBP12.61□□□□□ -0.39
COL18A1-206ENST00000459895 LVRNQ6Q4G3 990 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 CAPN12Q6ZSI9 719 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 CCDC25Q86WR0 208 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 CILP2Q8IUL8 1156 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 DENND6AQ8IWF6 608 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 NAGSQ8N159 534 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 SDR16C5Q8N3Y7 309 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 GPR156Q8NFN8 814 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 HM13Q8TCT9 377 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 SLC37A2Q8TED4 501 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 HEXDCQ8WVB3 486 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 LPGAT1Q92604 370 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 LRRC39Q96DD0 335 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 CERS2Q96G23 380 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 ZNF514Q96K75 400 aaPredicted RBP12.61□□□□□ -0.39
COL18A1-206ENST00000459895 FAM167BQ9BTA0 163 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 NAT9Q9BTE0 207 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 PHACTR1Q9C0D0 580 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 EPB41L5Q9HCM4 733 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 FAM169AQ9Y6X4 670 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 PTPRBP23467 1997 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 UBA6A0AVT1 1052 aaPredicted RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 MAGEB16A2A368 324 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 PDZK1P1A8MUH7 402 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 CASC3O15234 703 aaKnown RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 POP7O75817 140 aaKnown RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 AP2A2O94973 939 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 TTC4O95801 387 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 RHOXF2BP0C7M4 288 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 ERVK-10P10266 1014 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 BRAFP15056 766 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 CKMT2P17540 419 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 ACP1P24666 158 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 CLCNKAP51800 687 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 EIF3BP55884 814 aaKnown RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 CAV1Q03135 178 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 CCDC157Q569K6 752 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 ZNF789Q5FWF6 425 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 PERM1Q5SV97 790 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 TEX35Q5T0J7 233 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 UBAP2Q5T6F2 1119 aaKnown RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 RNF187Q5TA31 235 aaPredicted RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 LYPLAL1Q5VWZ2 237 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 MRNIPQ6NTE8 343 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 NEPROQ6NW34 567 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 DUS1LQ6P1R4 473 aaKnown RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 CERS6Q6ZMG9 384 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 EFL1Q7Z2Z2 1120 aaKnown RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 AMZ2Q86W34 360 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 GPR150Q8NGU9 434 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 IFI44Q8TCB0 444 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 SCG3Q8WXD2 468 aaKnown RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 CCDC74AQ96AQ1 378 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 LINC00615Q96LM1 132 aaPredicted RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 RHOXF2Q9BQY4 288 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 P2RY12Q9H244 342 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 COG4Q9H9E3 785 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 PRDM8Q9NQV8 689 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 FBXO6Q9NRD1 293 aaPredicted RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 SCHIP1Q9P0W5 487 aaPredicted RBP12.6□□□□□ -0.39
COL18A1-206ENST00000459895 RABGEF1Q9UJ41 708 aa12.6□□□□□ -0.39
COL18A1-206ENST00000459895 CACNA1AO00555 2505 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 MGAT4DA6NG13 374 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 PRMT5O14744 637 aaPredicted RBP12.59□□□□□ -0.39
COL18A1-206ENST00000459895 EIF3HO15372 352 aaKnown RBP eCLIP12.59□□□□□ -0.394e-13■□□□□ 8.9
COL18A1-206ENST00000459895 RFPL3O75679 317 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 DKK1O94907 266 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 F3P13726 295 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 VCLP18206 1134 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 ITGB6P18564 788 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 RPL10P27635 214 aaKnown RBP12.59□□□□□ -0.39
COL18A1-206ENST00000459895 ABCG1P45844 678 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 PREPP48147 710 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 CLDN6P56747 220 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 CBLBQ13191 982 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 CTBP1Q13363 440 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 THOC5Q13769 683 aaKnown RBP12.59□□□□□ -0.39
COL18A1-206ENST00000459895 BOP1Q14137 746 aaKnown RBP12.59□□□□□ -0.39
COL18A1-206ENST00000459895 GLE1Q53GS7 698 aaKnown RBP12.59□□□□□ -0.39
COL18A1-206ENST00000459895 HSP90AA5PQ58FG0 334 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 NAPRTQ6XQN6 538 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 DGLUCYQ7Z3D6 616 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 C17orf82Q86X59 251 aaPredicted RBP12.59□□□□□ -0.39
COL18A1-206ENST00000459895 CNTN4Q8IWV2 1026 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 GSPT2Q8IYD1 628 aaKnown RBP12.59□□□□□ -0.39
COL18A1-206ENST00000459895 KRT222Q8N1A0 295 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 SFRP1Q8N474 314 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 OR2L2Q8NH16 312 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 GSDMBQ8TAX9 411 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 GLMNQ92990 594 aa12.59□□□□□ -0.39
COL18A1-206ENST00000459895 RMDN2Q96LZ7 410 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms