RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TBL1XO60907 577 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 CLASP2O75122 1294 aaKnown RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 PRLP01236 227 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 FUCA1P04066 466 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 PSMA4P25789 261 aaKnown RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 EEF1DP29692 281 aaKnown RBP12.28□□□□□ -0.44
LINC00959-201ENST00000456581 GSK3BP49841 420 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 CLCN5P51795 746 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 ARF5P84085 180 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 C5orf22Q49AR2 442 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 HS6ST3Q8IZP7 471 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 MIER2Q8N344 545 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 BBS5Q8N3I7 341 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 SLC30A3Q99726 388 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 MAGEH1Q9H213 219 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 BPIFA1Q9NP55 256 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 EXD2Q9NVH0 621 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 CLEC4EQ9ULY5 219 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 NDUFAF1Q9Y375 327 aa12.28□□□□□ -0.44
LINC00959-201ENST00000456581 EYSQ5T1H1 3165 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 SUPT3HB4E1H0 165 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 CDC7O00311 574 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 GIPC1O14908 333 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 CLOCKO15516 846 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 URODP06132 367 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 CCT8P50990 548 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 KPNA2P52292 529 aaKnown RBP12.27□□□□□ -0.44
LINC00959-201ENST00000456581 WDR5P61964 334 aaKnown RBP12.27□□□□□ -0.44
LINC00959-201ENST00000456581 NFYCQ13952 458 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 C18orf21Q32NC0 220 aaPredicted RBP12.27□□□□□ -0.44
LINC00959-201ENST00000456581 ATXN7L2Q5T6C5 722 aaPredicted RBP12.27□□□□□ -0.44
LINC00959-201ENST00000456581 ACBD5Q5T8D3 534 aaPredicted RBP12.27□□□□□ -0.44
LINC00959-201ENST00000456581 KIAA2013Q8IYS2 634 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 HS3ST5Q8IZT8 346 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 CLYBLQ8N0X4 340 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 AFAP1L2Q8N4X5 818 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 MDGA1Q8NFP4 955 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 CALML6Q8TD86 181 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 FATE1Q969F0 183 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 MYRFLQ96LU7 910 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 TOX2Q96NM4 488 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 TRIB3Q96RU7 358 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 MGME1Q9BQP7 344 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 OSBPL6Q9BZF3 934 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 RC3H2Q9HBD1 1191 aaKnown RBP12.27□□□□□ -0.44
LINC00959-201ENST00000456581 ARMC1Q9NVT9 282 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 COMMD8Q9NX08 183 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 THEGQ9P2T0 379 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 UTS2RQ9UKP6 389 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 FCF1Q9Y324 198 aaKnown RBP12.27□□□□□ -0.44
LINC00959-201ENST00000456581 FADS3Q9Y5Q0 445 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 INSL5Q9Y5Q6 135 aa12.27□□□□□ -0.44
LINC00959-201ENST00000456581 PRAMEF12O95522 483 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 CLTBP09497 229 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 TCF3P15923 654 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 FASP25445 335 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 FMO4P31512 558 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 SH3BGRP55822 239 aaPredicted RBP12.27□□□□□ -0.45
LINC00959-201ENST00000456581 SELPLGQ14242 412 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 TGFBIQ15582 683 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 SLC36A3Q495N2 470 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 PAQR3Q6TCH7 311 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 KCTD8Q6ZWB6 473 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 EFHBQ8N7U6 833 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 PCYOX1LQ8NBM8 494 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 PDZD8Q8NEN9 1154 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 LPCAT1Q8NF37 534 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 OR4K2Q8NGD2 314 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 OR2T11Q8NH01 316 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 FAR2Q96K12 515 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 PSKH2Q96QS6 385 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 SEZ6LQ9BYH1 1024 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 AASSQ9UDR5 926 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 ZNF225Q9UK10 706 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 CPQQ9Y646 472 aa12.27□□□□□ -0.45
LINC00959-201ENST00000456581 KDELR3O43731 214 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 CLDN11O75508 207 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 GKP32189 559 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 ARL1P40616 181 aaPredicted RBP12.26□□□□□ -0.45
LINC00959-201ENST00000456581 LIPEQ05469 1076 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 TSNQ15631 228 aaKnown RBP12.26□□□□□ -0.45
LINC00959-201ENST00000456581 CYBRD1Q53TN4 286 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 SLC2A7Q6PXP3 512 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 Q6ZNX1 250 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 GAREM2Q75VX8 874 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 ITIH5Q86UX2 942 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 CAMK1DQ8IU85 385 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 TBC1D15Q8TC07 691 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 TMEM125Q96AQ2 219 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 FEM1CQ96JP0 617 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 YME1L1Q96TA2 773 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 CSF3RQ99062 836 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 TM6SF2Q9BZW4 377 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 MFSD1Q9H3U5 465 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 ALG2Q9H553 416 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 IL21Q9HBE4 155 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 TLR9Q9NR96 1032 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 SPG21Q9NZD8 308 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 SEPT3Q9UH03 358 aa12.26□□□□□ -0.45
LINC00959-201ENST00000456581 A0A1B0GVM2 712 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms