RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 MFSD4AQ8N468 514 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ATPAF2Q8N5M1 289 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 KCTD6Q8NC69 237 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 OR6C4Q8NGE1 309 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 NSMCE1Q8WV22 266 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 SNRNP27Q8WVK2 155 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 AP2M1Q96CW1 435 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 DTD2Q96FN9 168 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 SCRN2Q96FV2 425 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 MED8Q96G25 268 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF599Q96NL3 588 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 EIF3CQ99613 913 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 CMKLR1Q99788 373 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 SPOCK3Q9BQ16 436 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 MGME1Q9BQP7 344 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 BPIFA3Q9BQP9 254 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 FUCA2Q9BTY2 467 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 RIOK2Q9BVS4 552 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 GSDMCQ9BYG8 508 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 FRMD8Q9BZ67 464 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ARFGAP3Q9NP61 516 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 RBM22Q9NW64 420 aaKnown RBP eCLIP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 OCIAD1Q9NX40 245 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 WHRNQ9P202 907 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 CGGBP1Q9UFW8 167 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 IP6K2Q9UHH9 426 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNHIT2Q9UHR6 403 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ANAPC7Q9UJX3 599 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 SLC17A4Q9Y2C5 497 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 TTLL3Q9Y4R7 772 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 PCDHGA7Q9Y5G6 932 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 SCINQ9Y6U3 715 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 DOPEY2Q9Y3R5 2298 aa4.65□□□□□ -1.66
GTF3C3-208ENST00000455546 A0A0J9YYE9 177 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 SYCE3A1L190 88 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 CYSRT1A8MQ03 144 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 H3BS24 57 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 J3QKU1 62 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 MYO1FO00160 1098 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 NVLO15381 856 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC28A2O43868 658 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 MFSD11O43934 449 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 SNX2O60749 519 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 DNAJC6O75061 913 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 SOCS5O75159 536 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 PPM1BO75688 479 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 KCNH1O95259 989 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 CPNE6O95741 557 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 MBD3O95983 291 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 SOD1P00441 154 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 JCHAINP01591 159 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 TRBC1P01850 177 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 SERPING1P05155 500 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 CYP1A2P05177 515 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 NAT2P11245 290 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 CASP14P31944 242 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 HSPA9P38646 679 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 PBX1P40424 430 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 GARSP41250 739 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 ACTR1BP42025 376 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 ARSEP51690 589 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 EPHB1P54762 984 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 ACTR1AP61163 376 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 PPP2R2AP63151 447 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 GBE1Q04446 702 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 ILF3Q12906 894 aaKnown RBP eCLIP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 EIF3IQ13347 325 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 NFATC2Q13469 925 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 DPYSL3Q14195 570 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 TBR1Q16650 682 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 C21orf62-AS1Q17RA5 79 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 MAP9Q49MG5 647 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 PYCR3Q53H96 274 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 MANEAQ5SRI9 462 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 ZFYVE27Q5T4F4 411 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 NCBP2-AS2Q69YL0 99 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 ALKBH5Q6P6C2 394 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 CRTC3Q6UUV7 619 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 CHST15Q7LFX5 561 aaPredicted RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 C17orf82Q86X59 251 aaPredicted RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 DTX1Q86Y01 620 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 PLD6Q8N2A8 252 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 BBS5Q8N3I7 341 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 TEX26Q8N6G2 289 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 PQLC3Q8N755 202 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 LPCAT1Q8NF37 534 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 ARRDC2Q8TBH0 407 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 KIAA1524Q8TCG1 905 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 THAP3Q8WTV1 239 aaPredicted RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 TEKT4Q8WW24 435 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 HTR3CQ8WXA8 447 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 RAPGEF5Q92565 580 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 ART4Q93070 314 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 EID2BQ96D98 161 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 WBP1Q96G27 269 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 WDR24Q96S15 920 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 CTRCQ99895 268 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 PACSIN1Q9BY11 444 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 TRIM4Q9C037 500 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 TRNAU1APQ9NX07 287 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms