RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TIMM22Q9Y584 194 aa12.37□□□□□ -0.43
ECHDC1-209ENST00000454591 PCDHGC4Q9Y5F7 938 aa12.37□□□□□ -0.43
ECHDC1-209ENST00000454591 AK5Q9Y6K8 562 aa12.37□□□□□ -0.43
ECHDC1-209ENST00000454591 ZFC3H1O60293 1989 aaKnown RBP12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 OBSL1O75147 1896 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 H0YAE9 185 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 TULP3O75386 442 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 OR4F21O95013 312 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 OTCP00480 354 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 ETS2P15036 469 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 ATP6V1B1P15313 513 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 HOXB6P17509 224 aaKnown RBP12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 CKMT2P17540 419 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 HOXD10P28358 340 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 TTKP33981 857 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 UFM1P61960 85 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 ECT2LQ008S8 904 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 SP3Q02447 781 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 CAPRIN1Q14444 709 aaKnown RBP12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 KIAA0040Q15053 153 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 RBBP7Q16576 425 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 ATP6AP1LQ52LC2 224 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 ZRANB3Q5FWF4 1079 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 FAM219BQ5XKK7 198 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 NANOGP8Q6NSW7 305 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 DLEU7Q6UYE1 221 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 USP51Q70EK9 711 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 TAS1R1Q7RTX1 841 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 ERI1Q8IV48 349 aaKnown RBP12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 RIMKLAQ8IXN7 391 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 CPNE9Q8IYJ1 553 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 LRRC43Q8N309 656 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 CBARPQ8N350 705 aaPredicted RBP12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 CBR4Q8N4T8 237 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 DCAF4L2Q8NA75 395 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 OR8J3Q8NGG0 315 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 NMD3Q96D46 503 aaKnown RBP12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 ALG14Q96F25 216 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 HIC2Q96JB3 615 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 ZNF512Q96ME7 567 aaPredicted RBP12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 NANOGQ9H9S0 305 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 RDH14Q9HBH5 336 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 STARD7Q9NQZ5 370 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 SMOXQ9NWM0 555 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 EIF2B4Q9UI10 523 aaKnown RBP12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 LRFN2Q9ULH4 789 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 PKP3Q9Y446 797 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 CCL27Q9Y4X3 112 aa12.36□□□□□ -0.43
ECHDC1-209ENST00000454591 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 CBX4O00257 560 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 PLOD2O00469 737 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 GAPDHSO14556 408 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 OR7A17O14581 309 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 LSM1O15116 133 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 RAD51BO15315 384 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 ADAM12O43184 909 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 OR1I1O60431 355 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 SYNCRIPO60506 623 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 SNAP91O60641 907 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 BAIAP3O94812 1187 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 PGLSO95336 258 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 CDH1P12830 882 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 ZNF7P17097 686 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 CHRM3P20309 590 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 OXTRP30559 389 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 SLC5A2P31639 672 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 MAPK8P45983 427 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 GATMP50440 423 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 HNRNPFP52597 415 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 YBX1P67809 324 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 TRAF3Q13114 568 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 MAD2L1Q13257 205 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 LETMD1Q6P1Q0 360 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 DHRS4L2Q6PKH6 230 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 PRSS55Q6UWB4 352 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 METTL3Q86U44 580 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 SFRP1Q8N474 314 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 TRIML2Q8N7C3 387 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 HJURPQ8NCD3 748 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 PIH1D2Q8WWB5 315 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 CNDP2Q96KP4 475 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 PPP3R2Q96LZ3 170 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 ZIC5Q96T25 663 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 ACTL8Q9H568 366 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 IL1RL2Q9HB29 575 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 ATXN10Q9UBB4 475 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 RSL24D1Q9UHA3 163 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 OARD1Q9Y530 152 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 SLC30A1Q9Y6M5 507 aa12.35□□□□□ -0.43
ECHDC1-209ENST00000454591 UTRNP46939 3433 aa12.34□□□□□ -0.43
ECHDC1-209ENST00000454591 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.34□□□□□ -0.43
ECHDC1-209ENST00000454591 SAC3D1A6NKF1 404 aa12.34□□□□□ -0.43
ECHDC1-209ENST00000454591 AGAP14A8MT82 685 aa12.34□□□□□ -0.43
ECHDC1-209ENST00000454591 E5RI56 91 aa12.34□□□□□ -0.43
ECHDC1-209ENST00000454591 EIF3FO00303 357 aaPredicted RBP12.34□□□□□ -0.43
ECHDC1-209ENST00000454591 GREM1O60565 184 aa12.34□□□□□ -0.43
ECHDC1-209ENST00000454591 TRMUO75648 421 aaKnown RBP12.34□□□□□ -0.43
ECHDC1-209ENST00000454591 OLFM2O95897 454 aa12.34□□□□□ -0.43
ECHDC1-209ENST00000454591 LDLRP01130 860 aa12.34□□□□□ -0.43
ECHDC1-209ENST00000454591 CXCL10P02778 98 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms