RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SCHIP1Q9P0W5 487 aaPredicted RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 DHRS7Q9Y394 339 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 DNMT3AQ9Y6K1 912 aaPredicted RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 NCKAP5O14513 1909 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 TPP1O14773 563 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CD3EAPO15446 510 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 BUD23O43709 281 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 CBFA2T3O75081 653 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 KLF8O95600 359 aaPredicted RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 APODP05090 189 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CD22P20273 847 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 LPOP22079 712 aaPredicted RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 CASP2P42575 452 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 C21orf58P58505 322 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CDK3Q00526 305 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 TMED2Q15363 201 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CHRNA6Q15825 494 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 METRNLQ641Q3 311 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 PMS2CLQ68D20 193 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 IL31Q6EBC2 164 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CYB5D1Q6P9G0 228 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 PDIK1LQ8N165 341 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 C4orf33Q8N1A6 199 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CCDC197Q8NCU1 140 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 OR4L1Q8NH43 312 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 MAPK15Q8TD08 544 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ASB11Q8WXH4 323 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 APOL2Q9BQE5 337 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CADM1Q9BY67 442 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 CHRNA10Q9GZZ6 450 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 MMADHCQ9H3L0 296 aaPredicted RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 TBC1D17Q9HA65 648 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 SNX15Q9NRS6 342 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 TOR4AQ9NXH8 423 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 TMEM216Q9P0N5 145 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 KLHL8Q9P2G9 620 aaPredicted RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 ATXN10Q9UBB4 475 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ZC3H7BQ9UGR2 993 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 SLC25A13Q9UJS0 675 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 METTL12A8MUP2 240 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 OR7A17O14581 309 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 RNGTTO60942 597 aaKnown RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 SPAG7O75391 227 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ATP6V1G2O95670 118 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ONECUT2O95948 504 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 PRNPP04156 253 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 SNRPAP09012 282 aaKnown RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 MPC1LP0DKB6 136 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 NQO1P15559 274 aaKnown RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 ZNF8P17098 575 aaPredicted RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 RHOAP61586 193 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 CFHR1Q03591 330 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 POU6F1Q14863 301 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 CYP2A13Q16696 494 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 GKAP1Q5VSY0 366 aaPredicted RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 PIM3Q86V86 326 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 OR2L2Q8NH16 312 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 UHMK1Q8TAS1 419 aaKnown RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 RDH11Q8TC12 318 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 NRG4Q8WWG1 115 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 HDAC10Q969S8 669 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 OR4K3Q96R72 315 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 MECRQ9BV79 373 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 SGPP1Q9BX95 441 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 C6orf106Q9H6K1 298 aaPredicted RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 MANSC1Q9H8J5 431 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ZFYVE1Q9HBF4 777 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ZBTB26Q9HCK0 441 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 TRIM33Q9UPN9 1127 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 WDR37Q9Y2I8 494 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 PCDHB9Q9Y5E1 797 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ARHGEF17Q96PE2 2063 aaPredicted RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 A0A088AWK7 358 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 A0A1W2PPC4 97 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 CFAP73A6NFT4 308 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 TMEM114B3SHH9 223 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 H3BNX3 289 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ANKRD28O15084 1053 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 KLHL2O95198 593 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 PHBP35232 272 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 SPAM1P38567 509 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 PTGER3P43115 390 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 VPS41P49754 854 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 SCNN1BP51168 640 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 TAS2R39P59534 338 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 PDE1BQ01064 536 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 POU4F1Q01851 419 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 BST1Q10588 318 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 PPM1JQ5JR12 505 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 HP1BP3Q5SSJ5 553 aaPredicted RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 ARMC12Q5T9G4 340 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 UGT3A1Q6NUS8 523 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ZYG11AQ6WRX3 759 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ZNF852Q6ZMS4 543 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 BNC2Q6ZN30 1099 aaPredicted RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 RINLQ6ZS11 566 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 CACNA2D3Q8IZS8 1091 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 IPMKQ8NFU5 416 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 VPS39Q96JC1 886 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ZSCAN5AQ9BUG6 496 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms