RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 SYNDIG1Q9H7V2 258 aa14.43□□□□□ -0.1
VPS16-205ENST00000453689 ANKZF1Q9H8Y5 726 aa14.43□□□□□ -0.1
VPS16-205ENST00000453689 TREX1Q9NSU2 369 aa14.43□□□□□ -0.1
VPS16-205ENST00000453689 SLC2A6Q9UGQ3 507 aa14.43□□□□□ -0.1
VPS16-205ENST00000453689 TEX264Q9Y6I9 313 aa14.43□□□□□ -0.1
VPS16-205ENST00000453689 MAP1BP46821 2468 aaKnown RBP14.42□□□□□ -0.1
VPS16-205ENST00000453689 TRBV23OR9-2A0A075B6M9 112 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 A0A1W2PQM1 296 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 A6NCN8 305 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 TRABD2BA6NFA1 517 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 AGAP14A8MT82 685 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 SNX2O60749 519 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 CSO75390 466 aaKnown RBP14.42□□□□□ -0.1
VPS16-205ENST00000453689 BANF1O75531 89 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 TCEA3O75764 348 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 PROS1P07225 676 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 ZNF7P17097 686 aaPredicted RBP14.42□□□□□ -0.1
VPS16-205ENST00000453689 PGAM1P18669 254 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 PAMP19021 973 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 NMBRP28336 390 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 ECHS1P30084 290 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 AKT1P31749 480 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 MC4RP32245 332 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 ELK3P41970 407 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 ARSDP51689 593 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 CLCNKAP51800 687 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 CTSCP53634 463 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 RBM44Q6ZP01 1051 aaKnown RBP14.42□□□□□ -0.1
VPS16-205ENST00000453689 ZNF438Q7Z4V0 828 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 SPRED1Q7Z699 444 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 C11orf96Q7Z7L8 435 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 TMEM135Q86UB9 458 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 TRAPPC5Q8IUR0 188 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 Q8N9G6 341 aaPredicted RBP14.42□□□□□ -0.1
VPS16-205ENST00000453689 EIF1ADQ8N9N8 165 aaKnown RBP14.42□□□□□ -0.1
VPS16-205ENST00000453689 WDR48Q8TAF3 677 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 SLC37A2Q8TED4 501 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 ZNF669Q96BR6 464 aaPredicted RBP14.42□□□□□ -0.1
VPS16-205ENST00000453689 MFSD3Q96ES6 412 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 CDKN2AIPNLQ96HQ2 116 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 WDR83Q9BRX9 315 aaKnown RBP14.42□□□□□ -0.1
VPS16-205ENST00000453689 TIMM29Q9BSF4 260 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 TSPYL1Q9H0U9 437 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 LRRN3Q9H3W5 708 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 OSGEPL1Q9H4B0 414 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 FAM96AQ9H5X1 160 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 SAYSD1Q9NPB0 183 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 KLC4Q9NSK0 619 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 CRLS1Q9UJA2 301 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 CHMP2BQ9UQN3 213 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 PCDHB1Q9Y5F3 818 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 SLC30A1Q9Y6M5 507 aa14.42□□□□□ -0.1
VPS16-205ENST00000453689 TMEM8BA6NDV4 472 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 PRR19A6NJB7 356 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 RHPN2P1A8MT19 583 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 PPM1DO15297 605 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 USP1O94782 785 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 TTC4O95801 387 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 CAPNS1P04632 268 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 RPLP0P05388 317 aaKnown RBP14.41□□□□□ -0.1
VPS16-205ENST00000453689 POLBP06746 335 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 MSH3P20585 1137 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 ITGALP20701 1170 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 TNFRSF8P28908 595 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 CDKN1CP49918 316 aaPredicted RBP14.41□□□□□ -0.1
VPS16-205ENST00000453689 PRAMEP78395 509 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 B4GALNT1Q00973 533 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 SPIDRQ14159 915 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 NR1D2Q14995 579 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 FASTKD3Q14CZ7 662 aaKnown RBP14.41□□□□□ -0.1
VPS16-205ENST00000453689 ANKRD20A4Q4UJ75 823 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 KIAA0930Q6ICG6 404 aaPredicted RBP14.41□□□□□ -0.1
VPS16-205ENST00000453689 TMEM220Q6QAJ8 160 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 AFTPHQ6ULP2 937 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 CES3Q6UWW8 571 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 SNX20Q7Z614 316 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 CCDC25Q86WR0 208 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 IGDCC3Q8IVU1 814 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 ZBED8Q8IZ13 594 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 NXPE1Q8N323 547 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 SFRP1Q8N474 314 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 FBXO36Q8NEA4 188 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 HDAC10Q969S8 669 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 ULK4Q96C45 1275 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 CCDC97Q96F63 343 aaPredicted RBP14.41□□□□□ -0.1
VPS16-205ENST00000453689 GFM1Q96RP9 751 aaKnown RBP14.41□□□□□ -0.1
VPS16-205ENST00000453689 ZC3H7BQ9UGR2 993 aaKnown RBP14.41□□□□□ -0.1
VPS16-205ENST00000453689 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.41□□□□□ -0.1
VPS16-205ENST00000453689 NFU1Q9UMS0 254 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 DNAJC16Q9Y2G8 782 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 ENTPD2Q9Y5L3 495 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 RPS6KL1Q9Y6S9 549 aa14.41□□□□□ -0.1
VPS16-205ENST00000453689 V9GYY5 206 aaPredicted RBP14.41□□□□□ -0.1
VPS16-205ENST00000453689 ASPMQ8IZT6 3477 aa14.4□□□□□ -0.1
VPS16-205ENST00000453689 TPRP12270 2363 aaKnown RBP14.4□□□□□ -0.1
VPS16-205ENST00000453689 TRBV5-4A0A0C4DH59 114 aa14.4□□□□□ -0.1
VPS16-205ENST00000453689 ZCWPW2A0A1B0GU75 182 aa14.4□□□□□ -0.1
VPS16-205ENST00000453689 CCDC162PA2VCL2 907 aa14.4□□□□□ -0.1
VPS16-205ENST00000453689 OR2AG2A6NM03 316 aa14.4□□□□□ -0.1
VPS16-205ENST00000453689 D6RAR5 112 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms