RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 COLGALT1Q8NBJ5 622 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 TXNDC5Q8NBS9 432 aaKnown RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 TTLQ8NG68 377 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 SETD6Q8TBK2 473 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 DNAJB14Q8TBM8 379 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 DACT3Q96B18 629 aaPredicted RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 GIMAP5Q96F15 307 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 CCDC17Q96LX7 622 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 OR2A14Q96R47 310 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 GPR22Q99680 433 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 ZNF670Q9BS34 389 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 CDADC1Q9BWV3 514 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 SCPEP1Q9HB40 452 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 EML4Q9HC35 981 aaKnown RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 ACOT13Q9NPJ3 140 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 NYAP2Q9P242 653 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 NUFIP1Q9UHK0 495 aaKnown RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 TMPRSS11EQ9UL52 423 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 TPRKBQ9Y3C4 175 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 DAGLAQ9Y4D2 1042 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 PEX16Q9Y5Y5 336 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 LINC00854A0A1B0GVQ3 168 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 TMEM229AB2RXF0 380 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 C9JVG2 144 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 INO80B-WBP1J3KQ70 363 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 PLD2O14939 933 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 TFECO14948 347 aaPredicted RBP8.52□□□□□ -1.04
LSM5-208ENST00000450169 NDUFA2O43678 99 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 AIREO43918 545 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 HUS1O60921 280 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 TULP3O75386 442 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 SERPINI2O75830 405 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 PGLSO95336 258 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 COL6A1P12109 1028 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 PDGFRAP16234 1089 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 ITGB6P18564 788 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 CYP2F1P24903 491 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 RYKP34925 604 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 HNF4AP41235 474 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 SLC35A2P78381 396 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 IL5RAQ01344 420 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 MGAT3Q09327 533 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 FAM26DQ5JW98 314 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 MFSD14BQ5SR56 506 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 CLVS2Q5SYC1 327 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 ZNF470Q6ECI4 717 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 CUZD1Q86UP6 607 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 ATCAYQ86WG3 371 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 LIX1LQ8IVB5 337 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 C4orf19Q8IY42 314 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 FLCNQ8NFG4 579 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 OR4M2Q8NGB6 313 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 HTR3CQ8WXA8 447 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 CEP19Q96LK0 163 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 SDHCQ99643 169 aaPredicted RBP8.52□□□□□ -1.04
LSM5-208ENST00000450169 PRRG3Q9BZD7 231 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 NIF3L1Q9GZT8 377 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 TSPAN10Q9H1Z9 355 aaPredicted RBP8.52□□□□□ -1.04
LSM5-208ENST00000450169 DUSP21Q9H596 190 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 ACAD9Q9H845 621 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 ERVMER34-1Q9H9K5 563 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 WASH6PQ9NQA3 447 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 PRDM8Q9NQV8 689 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 ZC4H2Q9NQZ6 224 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 KCNH7Q9NS40 1196 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 IL20Q9NYY1 176 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 TRMT6Q9UJA5 497 aaKnown RBP8.52□□□□□ -1.04
LSM5-208ENST00000450169 C3orf18Q9UK00 162 aa8.52□□□□□ -1.04
LSM5-208ENST00000450169 ARPC4-TTLL3A0A0A6YYG9 625 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 ZCWPW2A0A1B0GU75 182 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 A8MUA0 341 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 EEF2KO00418 725 aaKnown RBP8.52□□□□□ -1.05
LSM5-208ENST00000450169 DSCR3O14972 297 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 OGTO15294 1046 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 DHX15O43143 795 aaKnown RBP8.52□□□□□ -1.05
LSM5-208ENST00000450169 MED7O43513 233 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 KATNA1O75449 491 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 UGT2B17O75795 530 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 CST3P01034 146 aaPredicted RBP8.52□□□□□ -1.05
LSM5-208ENST00000450169 IGHA2P01877 340 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 MT-ND2P03891 347 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 SLURP2P0DP57 97 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 RAP2AP10114 183 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 IL1R1P14778 569 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 ITGB5P18084 799 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 HRH2P25021 359 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 FMO3P31513 532 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 ETV6P41212 452 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 RFX2P48378 723 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 UGT2B15P54855 530 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 DNAJB13P59910 316 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 SEMA3BQ13214 749 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 TNK1Q13470 666 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 IL18R1Q13478 541 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 MFSD13AQ14CX5 517 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 ARMC4Q5T2S8 1044 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 PIK3R6Q5UE93 754 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 STYK1Q6J9G0 422 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 TRNP1Q6NT89 227 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms