RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 IL17CQ9P0M4 197 aa12.29□□□□□ -0.44
SSR4-205ENST00000447375 FEZ2Q9UHY8 353 aaPredicted RBP12.29□□□□□ -0.44
SSR4-205ENST00000447375 SNX12Q9UMY4 172 aa12.29□□□□□ -0.44
SSR4-205ENST00000447375 CRYBG3Q68DQ2 2970 aa12.29□□□□□ -0.44
SSR4-205ENST00000447375 SDK2Q58EX2 2172 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 PRSS38A1L453 326 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 FADS2P1A8MWK0 482 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 IFNB1P01574 187 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 IVLP07476 585 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 OAS2P29728 719 aaKnown RBP12.28□□□□□ -0.44
SSR4-205ENST00000447375 POLD2P49005 469 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 GNG11P61952 73 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 MAP9Q49MG5 647 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 CERCAMQ5T4B2 595 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 ZDHHC20Q5W0Z9 365 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 PDPK2PQ6A1A2 396 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 ASB18Q6ZVZ8 466 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 GLT6D1Q7Z4J2 308 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 PIM3Q86V86 326 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 TRAM1L1Q8N609 369 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 GLIS1Q8NBF1 620 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 RCBTB1Q8NDN9 531 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 BRSK1Q8TDC3 778 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 ACTRT1Q8TDG2 376 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 NAP1L3Q99457 506 aaPredicted RBP12.28□□□□□ -0.44
SSR4-205ENST00000447375 C19orf43Q9BQ61 176 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 ZSCAN5AQ9BUG6 496 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 LRRC40Q9H9A6 602 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 RDH14Q9HBH5 336 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 ETNK1Q9HBU6 452 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 CYP4F12Q9HCS2 524 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 IL26Q9NPH9 171 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 CASS4Q9NQ75 786 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.28□□□□□ -0.44
SSR4-205ENST00000447375 PAK5Q9P286 719 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 LRIT1Q9P2V4 623 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 B3GALT1Q9Y5Z6 326 aa12.28□□□□□ -0.44
SSR4-205ENST00000447375 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
SSR4-205ENST00000447375 ERI2A8K979 691 aaKnown RBP12.27□□□□□ -0.45
SSR4-205ENST00000447375 HGSO14964 777 aaPredicted RBP12.27□□□□□ -0.45
SSR4-205ENST00000447375 INPP4BO15327 924 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 SUN1O94901 812 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 CPNE6O95741 557 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 SLC4A1P02730 911 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 ETS1P14921 441 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 LPOP22079 712 aaPredicted RBP12.27□□□□□ -0.45
SSR4-205ENST00000447375 RPL22P35268 128 aaKnown RBP12.27□□□□□ -0.45
SSR4-205ENST00000447375 FDFT1P37268 417 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 KCNJ1P48048 391 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 B4GALNT1Q00973 533 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 TAF1AQ15573 450 aaPredicted RBP12.27□□□□□ -0.45
SSR4-205ENST00000447375 CYP1B1Q16678 543 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 TCTN3Q6NUS6 607 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 C16orf46Q6P387 395 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 OGFOD3Q6PK18 319 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 C4orf22Q6V702 233 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 PRUNE1Q86TP1 453 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 TRIM74Q86UV6 250 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 CCDC89Q8N998 374 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 PTCD2Q8WV60 388 aaKnown RBP12.27□□□□□ -0.45
SSR4-205ENST00000447375 KIAA1143Q96AT1 154 aaPredicted RBP12.27□□□□□ -0.45
SSR4-205ENST00000447375 EFHD1Q9BUP0 239 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 DDA1Q9BW61 102 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 SPATA16Q9BXB7 569 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 TMEM168Q9H0V1 697 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 BPIFA1Q9NP55 256 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 RAB6BQ9NRW1 208 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 TRNAU1APQ9NX07 287 aaKnown RBP12.27□□□□□ -0.45
SSR4-205ENST00000447375 VPS18Q9P253 973 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 TMEM98Q9Y2Y6 226 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 PKP3Q9Y446 797 aa12.27□□□□□ -0.45
SSR4-205ENST00000447375 OAS3Q9Y6K5 1087 aaKnown RBP12.27□□□□□ -0.45
SSR4-205ENST00000447375 WIPF3A6NGB9 483 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 C2orf81A6NN90 581 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 MKRN2OSH3BPM6 223 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 PGRMC1O00264 195 aaKnown RBP12.26□□□□□ -0.45
SSR4-205ENST00000447375 BUD23O43709 281 aaKnown RBP12.26□□□□□ -0.45
SSR4-205ENST00000447375 CRTAMO95727 393 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 ZSCAN5DPP0CG00 497 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 TCP1P17987 556 aaKnown RBP12.26□□□□□ -0.45
SSR4-205ENST00000447375 PDE1BQ01064 536 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 MC1RQ01726 317 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 SEMA5AQ13591 1074 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 AMZ1Q400G9 498 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 C14orf28Q4W4Y0 310 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 PYCR3Q53H96 274 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 PAPD7Q5XG87 772 aaKnown RBP12.26□□□□□ -0.45
SSR4-205ENST00000447375 ALS2CLQ60I27 953 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 LINC00523Q86TU6 105 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 TAB3Q8N5C8 712 aaPredicted RBP12.26□□□□□ -0.45
SSR4-205ENST00000447375 FAM46DQ8NEK8 389 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 ART4Q93070 314 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 GLYATL1Q969I3 302 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 MAGOHBQ96A72 148 aaKnown RBP12.26□□□□□ -0.45
SSR4-205ENST00000447375 MOCOSQ96EN8 888 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 VPS35Q96QK1 796 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 AP1M1Q9BXS5 423 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 ASPSCR1Q9BZE9 553 aa12.26□□□□□ -0.45
SSR4-205ENST00000447375 CARS2Q9HA77 564 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms