RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 GPR22Q99680 433 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 SLC13A1Q9BZW2 595 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 SPATS2LQ9NUQ6 558 aaKnown RBP17.13■□□□□ 0.33
SGCE-206ENST00000445866 FAM86C1Q9NVL1 165 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 FAM8A1Q9UBU6 413 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 SLC23A2Q9UGH3 650 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 KLF15Q9UIH9 416 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 ABCA7Q8IZY2 2146 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 IQANK1A0A1B0GTG1 560 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 HMX2A2RU54 273 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 TRIM49D1C9J1S8 452 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 VPS26AO75436 327 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 CSF2P04141 144 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 CTSEP14091 401 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 MPLP40238 635 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 SKIV2L2P42285 1042 aaKnown RBP17.13■□□□□ 0.33
SGCE-206ENST00000445866 CTSKP43235 329 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 TAS2R39P59534 338 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 BNC1Q01954 994 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 PLA2G4EQ3MJ16 856 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 NAPRTQ6XQN6 538 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 OTOAQ7RTW8 1153 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 CFAP206Q8IYR0 622 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 PHACTR4Q8IZ21 702 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 SUMF1Q8NBK3 374 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 ELMO1Q92556 727 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 KCNJ9Q92806 393 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 LINC00615Q96LM1 132 aaPredicted RBP17.13■□□□□ 0.33
SGCE-206ENST00000445866 OR2M4Q96R27 311 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 RUFY1Q96T51 708 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 OLFM1Q99784 485 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 TMEM168Q9H0V1 697 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 TCEAL2Q9H3H9 227 aaPredicted RBP17.13■□□□□ 0.33
SGCE-206ENST00000445866 CENPHQ9H3R5 247 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 CAB39LQ9H9S4 337 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 CTNNAL1Q9UBT7 734 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 DNAJC16Q9Y2G8 782 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 PLEKHM1Q9Y4G2 1056 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 TRPM6Q9BX84 2022 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 MGAT4DA6NG13 374 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 RETP07949 1114 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 ACP5P13686 325 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 CCR7P32248 378 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 PGGT1BP53609 377 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 ARHGAP8P85298 464 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 TIAL1Q01085 375 aaKnown RBP eCLIP17.12■□□□□ 0.33
SGCE-206ENST00000445866 RASA2Q15283 850 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 TMED2Q15363 201 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 TCEA2Q15560 299 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 INSCQ1MX18 579 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 UGT3A1Q6NUS8 523 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 C11orf96Q7Z7L8 435 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 CYP4X1Q8N118 509 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 OR2L2Q8NH16 312 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 LKAAEAR1Q8TD35 194 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 MTBPQ96DY7 904 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 GPR21Q99679 349 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 CAAP1Q9H8G2 361 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 ERVMER34-1Q9H9K5 563 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 FSCN3Q9NQT6 498 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 KLC4Q9NSK0 619 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 GON4LQ3T8J9 2241 aa17.12■□□□□ 0.33
SGCE-206ENST00000445866 C17orf113A0A1B0GUU1 675 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 KHNYNO15037 678 aaKnown RBP17.11■□□□□ 0.33
SGCE-206ENST00000445866 KPNA5O15131 536 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 MT-ND3P03897 115 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 STMN1P16949 149 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 VCLP18206 1134 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 AOAHP28039 575 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 IRX4P78413 519 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 CTBSQ01459 385 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 PDAP1Q13442 181 aaKnown RBP17.11■□□□□ 0.33
SGCE-206ENST00000445866 PRRT3Q5FWE3 981 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 SLC23A3Q6PIS1 610 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 CROCCP2Q86T23 111 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 SIDT2Q8NBJ9 832 aaKnown RBP17.11■□□□□ 0.33
SGCE-206ENST00000445866 INPP5DQ92835 1189 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 TSPAN17Q96FV3 270 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 NUSAP1Q9BXS6 441 aaKnown RBP17.11■□□□□ 0.33
SGCE-206ENST00000445866 SMOC1Q9H4F8 434 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 VIPAS39Q9H9C1 493 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 CAPN10Q9HC96 672 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 TRNAU1APQ9NX07 287 aaKnown RBP17.11■□□□□ 0.33
SGCE-206ENST00000445866 TRMT6Q9UJA5 497 aaKnown RBP17.11■□□□□ 0.33
SGCE-206ENST00000445866 MED16Q9Y2X0 877 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 DHRS7Q9Y394 339 aa17.11■□□□□ 0.33
SGCE-206ENST00000445866 KCNJ13O60928 360 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 GSTM1P09488 218 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 KRT15P19012 456 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 FDXRP22570 491 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 CRABP2P29373 138 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 TYK2P29597 1187 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 CLCN7P51798 805 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 HNRNPKP61978 463 aaKnown RBP eCLIP17.1■□□□□ 0.331e-10■■■■■ 35.6
SGCE-206ENST00000445866 GSTM4Q03013 218 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 HSPA14Q0VDF9 509 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 DNAJC3Q13217 504 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 C1orf61Q13536 156 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 RAPH1Q70E73 1250 aa17.1■□□□□ 0.33
SGCE-206ENST00000445866 PIM3Q86V86 326 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms