RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ZNF8P17098 575 aaPredicted RBP16.98■□□□□ 0.31
LIME1-202ENST00000444951 KELP23276 732 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 FMO4P31512 558 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 HSD17B3P37058 310 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 CTSKP43235 329 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 EIF3BP55884 814 aaKnown RBP16.98■□□□□ 0.31
LIME1-202ENST00000444951 B4GALNT1Q00973 533 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 FZD2Q14332 565 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 MACC1Q6ZN28 852 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 STRA8Q7Z7C7 330 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 IQCHQ86VS3 1027 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 SPATS2Q86XZ4 545 aaKnown RBP16.98■□□□□ 0.31
LIME1-202ENST00000444951 HID1Q8IV36 788 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 RBFAQ8N0V3 343 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 CLDN19Q8N6F1 224 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 RASGEF1AQ8N9B8 481 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 C2CD4AQ8NCU7 369 aaPredicted RBP16.98■□□□□ 0.31
LIME1-202ENST00000444951 OR56A4Q8NGH8 313 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 RHBDD1Q8TEB9 315 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 OR1E3Q8WZA6 343 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 SGF29Q96ES7 293 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 CYTH2Q99418 400 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 ZCCHC2Q9C0B9 1178 aaKnown RBP16.98■□□□□ 0.31
LIME1-202ENST00000444951 CLPBQ9H078 707 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 CYP4F12Q9HCS2 524 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 FGF22Q9HCT0 170 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 DNAJC28Q9NX36 388 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 TXNDC16Q9P2K2 825 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 ZNHIT2Q9UHR6 403 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 APOBEC2Q9Y235 224 aaKnown RBP16.98■□□□□ 0.31
LIME1-202ENST00000444951 PSAT1Q9Y617 370 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 SPTY2D1-AS1A0A0U1RR47 76 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 POC1B-GALNT4F8VUJ3 575 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 FLRT2O43155 660 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 MAGEC1O60732 1142 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 DKK1O94907 266 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 HOXC4P09017 264 aaPredicted RBP16.97■□□□□ 0.31
LIME1-202ENST00000444951 ZNF7P17097 686 aaPredicted RBP16.97■□□□□ 0.31
LIME1-202ENST00000444951 PBLDP30039 288 aaPredicted RBP16.97■□□□□ 0.31
LIME1-202ENST00000444951 GNPDA1P46926 289 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 NXPH1P58417 271 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 SRP54P61011 504 aaKnown RBP16.97■□□□□ 0.31
LIME1-202ENST00000444951 OVGP1Q12889 678 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 ITIH4Q14624 930 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 TYSND1Q2T9J0 566 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 PLA2G4EQ3MJ16 856 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 CNSTQ6PJW8 725 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 TMEM220Q6QAJ8 160 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 PROSER1Q86XN7 944 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 DCP2Q8IU60 420 aaKnown RBP16.97■□□□□ 0.31
LIME1-202ENST00000444951 TRAPPC5Q8IUR0 188 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 LMNTD2Q8IXW0 634 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 BEND7Q8N7W2 519 aaPredicted RBP16.97■□□□□ 0.31
LIME1-202ENST00000444951 PDXPQ96GD0 296 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 TCF12Q99081 682 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 EPB41L4BQ9H329 900 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 ACSS3Q9H6R3 686 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 CARS2Q9HA77 564 aaKnown RBP16.97■□□□□ 0.31
LIME1-202ENST00000444951 FAM8A1Q9UBU6 413 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 SUFUQ9UMX1 484 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 GPSM3Q9Y4H4 160 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 PRSS21Q9Y6M0 314 aa16.97■□□□□ 0.31
LIME1-202ENST00000444951 EXOC1LA0A1B0GW35 172 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 PRSS38A1L453 326 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 CCDC151A5D8V7 595 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 VEGFDO43915 354 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 FAM155BO75949 473 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 RASGRP1O95267 797 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 AHSGP02765 367 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 FUCA1P04066 466 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 ABHD2P08910 425 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 ATP1B2P14415 290 aaPredicted RBP16.96■□□□□ 0.31
LIME1-202ENST00000444951 ITGB6P18564 788 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 NSG1P42857 185 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 CTSCP53634 463 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 EIF2B5Q13144 721 aaKnown RBP16.96■□□□□ 0.31
LIME1-202ENST00000444951 ALG11Q2TAA5 492 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 RNF187Q5TA31 235 aaPredicted RBP16.96■□□□□ 0.31
LIME1-202ENST00000444951 PTRHD1Q6GMV3 140 aaKnown RBP16.96■□□□□ 0.31
LIME1-202ENST00000444951 CNTN4Q8IWV2 1026 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 MDM1Q8TC05 714 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 LPGAT1Q92604 370 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 ZBTB9Q96C00 473 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 GPR27Q9NS67 375 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 INTS10Q9NVR2 710 aaKnown RBP16.96■□□□□ 0.31
LIME1-202ENST00000444951 NSMCE4AQ9NXX6 385 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 PNMA8BQ9ULN7 279 aaPredicted RBP16.96■□□□□ 0.31
LIME1-202ENST00000444951 SLC17A4Q9Y2C5 497 aa16.96■□□□□ 0.31
LIME1-202ENST00000444951 PCYT1BQ9Y5K3 369 aaPredicted RBP16.96■□□□□ 0.31
LIME1-202ENST00000444951 SMG1Q96Q15 3661 aaKnown RBP16.96■□□□□ 0.31
LIME1-202ENST00000444951 ATRXP46100 2492 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 IGLV3-16A0A075B6K0 115 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 PRMT5O14744 637 aaPredicted RBP16.95■□□□□ 0.3
LIME1-202ENST00000444951 GRID2O43424 1007 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 NUAK1O60285 661 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 C1QAP02745 245 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 SHBGP04278 402 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 GABRB3P28472 473 aa16.95■□□□□ 0.3
LIME1-202ENST00000444951 LEPRP48357 1165 aaKnown RBP16.95■□□□□ 0.3
LIME1-202ENST00000444951 CD151P48509 253 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms