RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 LRRC39Q96DD0 335 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 CFAP36Q96G28 342 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 OSGEPL1Q9H4B0 414 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 C20orf96Q9NUD7 363 aaPredicted RBP15.76■□□□□ 0.11
USP39-205ENST00000442708 SCHIP1Q9P0W5 487 aaPredicted RBP15.76■□□□□ 0.11
USP39-205ENST00000442708 ZC3H7BQ9UGR2 993 aaKnown RBP15.76■□□□□ 0.11
USP39-205ENST00000442708 RP1P56715 2156 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 TRBV23OR9-2A0A075B6M9 112 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 CFAP99D6REC4 459 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 NDC80O14777 642 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 SNX2O60749 519 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 ERVK-10P10266 1014 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 BRAFP15056 766 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 PAMP19021 973 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 CAV1Q03135 178 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 TYSND1Q2T9J0 566 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 SPANXN3Q5MJ09 141 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 DNTTIP2Q5QJE6 756 aaKnown RBP15.75■□□□□ 0.11
USP39-205ENST00000442708 TRMT10BQ6PF06 316 aaKnown RBP15.75■□□□□ 0.11
USP39-205ENST00000442708 AMZ2Q86W34 360 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 CILP2Q8IUL8 1156 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 DENND6AQ8IWF6 608 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 ARL10Q8N8L6 244 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 OR2L2Q8NH16 312 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 LKAAEAR1Q8TD35 194 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 ZNF514Q96K75 400 aaPredicted RBP15.75■□□□□ 0.11
USP39-205ENST00000442708 LINC00615Q96LM1 132 aaPredicted RBP15.75■□□□□ 0.11
USP39-205ENST00000442708 NAT9Q9BTE0 207 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 P2RY12Q9H244 342 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 SAYSD1Q9NPB0 183 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 SLC17A6Q9P2U8 582 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 RABGEF1Q9UJ41 708 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 PADI4Q9UM07 663 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 WDR37Q9Y2I8 494 aa15.75■□□□□ 0.11
USP39-205ENST00000442708 DNMT3AQ9Y6K1 912 aaPredicted RBP15.75■□□□□ 0.11
USP39-205ENST00000442708 COL27A1Q8IZC6 1860 aaPredicted RBP15.75■□□□□ 0.11
USP39-205ENST00000442708 MGAT4DA6NG13 374 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 IQCF5A8MTL0 148 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 DKK1O94907 266 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 AP2A2O94973 939 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 TTC4O95801 387 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 S1PR4O95977 384 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 FTH1P19P0C7X4 201 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 ACP1P24666 158 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 RPL10P27635 214 aaKnown RBP15.74■□□□□ 0.11
USP39-205ENST00000442708 ECHS1P30084 290 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 NSG1P42857 185 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 TTPAP49638 278 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 DAB2P98082 770 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 DMPKQ09013 629 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 CTBP1Q13363 440 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 HLTFQ14527 1009 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP39-205ENST00000442708 NR0B2Q15466 257 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 SEPT7Q16181 437 aaKnown RBP15.74■□□□□ 0.11
USP39-205ENST00000442708 AARS2Q5JTZ9 985 aaKnown RBP15.74■□□□□ 0.11
USP39-205ENST00000442708 PERM1Q5SV97 790 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 ZNF470Q6ECI4 717 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 MRNIPQ6NTE8 343 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 IYDQ6PHW0 289 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 KCNMB4Q86W47 210 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 ZBED8Q8IZ13 594 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 OTUD6BQ8N6M0 293 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 LPGAT1Q92604 370 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 CCM2Q9BSQ5 444 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 FAM8A1Q9UBU6 413 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 CACNA1AO00555 2505 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 SPEGQ15772 3267 aa15.74■□□□□ 0.11
USP39-205ENST00000442708 CPED1A4D0V7 1026 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 EME2A4GXA9 379 aaPredicted RBP15.73■□□□□ 0.11
USP39-205ENST00000442708 EIF3HO15372 352 aaKnown RBP eCLIP15.73■□□□□ 0.11
USP39-205ENST00000442708 RHOXF2BP0C7M4 288 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 OGNP20774 298 aaKnown RBP15.73■□□□□ 0.11
USP39-205ENST00000442708 PMLP29590 882 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 SLC1A2P43004 574 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 CARSP49589 748 aaKnown RBP15.73■□□□□ 0.11
USP39-205ENST00000442708 MPP1Q00013 466 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 C14orf28Q4W4Y0 310 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 CCDC157Q569K6 752 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 HSP90AA5PQ58FG0 334 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 CTSL3PQ5NE16 218 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 N4BP2L1Q5TBK1 243 aaPredicted RBP15.73■□□□□ 0.11
USP39-205ENST00000442708 METRNLQ641Q3 311 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 NAPRTQ6XQN6 538 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 DGLUCYQ7Z3D6 616 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 CCDC25Q86WR0 208 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 CCNJLQ8IV13 435 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 SPNS2Q8IVW8 549 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 KRT222Q8N1A0 295 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 SFRP1Q8N474 314 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 ARL14Q8N4G2 192 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 IFI44Q8TCB0 444 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 SLC37A2Q8TED4 501 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 BIRC8Q96P09 236 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 RHOXF2Q9BQY4 288 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 FBXO6Q9NRD1 293 aaPredicted RBP15.73■□□□□ 0.11
USP39-205ENST00000442708 FAM114A2Q9NRY5 505 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 IARS2Q9NSE4 1012 aaKnown RBP15.73■□□□□ 0.11
USP39-205ENST00000442708 RNF215Q9Y6U7 377 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 SPTBN2O15020 2390 aa15.73■□□□□ 0.11
USP39-205ENST00000442708 PTPRBP23467 1997 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms