RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 STMN2Q93045 179 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 GLYATL1Q969I3 302 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 NXPE3Q969Y0 559 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 PTCD3Q96EY7 689 aaKnown RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 DTD2Q96FN9 168 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 P2RY13Q9BPV8 354 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 CCDC106Q9BWC9 280 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 HDAC8Q9BY41 377 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ABCG8Q9H221 673 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 C8orf33Q9H7E9 229 aaPredicted RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 BAIAP2L1Q9UHR4 511 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 PRR5-ARHGAP8B1AHC4 643 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 RFXAPO00287 272 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 GAPDHSO14556 408 aaPredicted RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 FFAR2O15552 330 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 TSPAN6O43657 245 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 NUAK1O60285 661 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 COX4I1P13073 169 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 LBPP18428 481 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 PIK3R1P27986 724 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 OPRD1P41143 372 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 AP1S2P56377 157 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ARHGAP8P85298 464 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 CDKL1Q00532 357 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ART3Q13508 389 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 CYLC2Q14093 348 aaPredicted RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 PTPRRQ15256 657 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 TGFBIQ15582 683 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 LSM12Q3MHD2 195 aaKnown RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 SLC9B1Q4ZJI4 515 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 C9orf64Q5T6V5 341 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 SPATA19Q7Z5L4 167 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 CHPFQ8IZ52 775 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 CPSF7Q8N684 471 aaKnown RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 PDPRQ8NCN5 879 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 KCNV2Q8TDN2 545 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 GANCQ8TET4 914 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ZNF483Q8TF39 744 aaPredicted RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 UBTD2Q8WUN7 234 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 EID2BQ96D98 161 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ZNF382Q96SR6 550 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 RTKNQ9BST9 563 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 TBC1D10AQ9BXI6 508 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 MEAF6Q9HAF1 191 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 PPM1HQ9ULR3 514 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 NCF1BA6NI72 391 aaPredicted RBP5.93□□□□□ -1.46
VPS50-205ENST00000441602 NCF1CA8MVU1 366 aaPredicted RBP5.93□□□□□ -1.46
VPS50-205ENST00000441602 PRRT4C9JH25 899 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 SDHDO14521 159 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 LINC01565O15544 149 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 DCXO43602 365 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 ESRRBO95718 433 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 HLA-EP13747 358 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 ADRB3P13945 408 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 NCF1P14598 390 aaPredicted RBP5.93□□□□□ -1.46
VPS50-205ENST00000441602 C5AR1P21730 350 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 CCNG1P51959 295 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 KCNJ2P63252 427 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 TIAL1Q01085 375 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS50-205ENST00000441602 BTKQ06187 659 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 BOP1Q14137 746 aaKnown RBP5.93□□□□□ -1.46
VPS50-205ENST00000441602 UBAP2LQ14157 1087 aaKnown RBP5.93□□□□□ -1.46
VPS50-205ENST00000441602 ACSBG2Q5FVE4 666 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 RAET1GQ6H3X3 334 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 UBE2R2Q712K3 238 aaPredicted RBP5.93□□□□□ -1.46
VPS50-205ENST00000441602 TECPR1Q7Z6L1 1165 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 GLMNQ92990 594 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 ARRDC3Q96B67 414 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 C19orf60Q96EN9 201 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 CATSPER2Q96P56 530 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 CCM2Q9BSQ5 444 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 BOCQ9BWV1 1114 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 C1orf21Q9H246 121 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 ZNF576Q9H609 170 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 EPHX3Q9H6B9 360 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 PRM3Q9NNZ6 103 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 UTP6Q9NYH9 597 aaKnown RBP5.93□□□□□ -1.46
VPS50-205ENST00000441602 CD84Q9UIB8 345 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 CD207Q9UJ71 328 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 G3BP2Q9UN86 482 aaKnown RBP5.93□□□□□ -1.46
VPS50-205ENST00000441602 MED16Q9Y2X0 877 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 STON1Q9Y6Q2 735 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 ANKRD36A6QL64 1941 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 KLHL33A6NCF5 533 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 EPOPA6NHQ4 379 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 IQCF5A8MTL0 148 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 CAPN14A8MX76 684 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 ZNF195O14628 629 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 RASSF9O75901 435 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 CDK14O94921 469 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 WDR47O94967 919 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 KCNA5P22460 613 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 AOAHP28039 575 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 EPHA3P29320 983 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 ETV3P41162 512 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 HNMTP50135 292 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 CDH13P55290 713 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 SEMG2Q02383 582 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 RALGDSQ12967 914 aa5.93□□□□□ -1.46
VPS50-205ENST00000441602 MAD2L1Q13257 205 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms