RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 WNT3AP56704 352 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 KLHDC8BQ8IXV7 354 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 DYNC2LI1Q8TCX1 351 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 BTBD2Q9BX70 525 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 UBQLN1Q9UMX0 589 aaKnown RBP20.06■□□□□ 0.8
SHOX2-203ENST00000441443 FAM92AA1XBS5 289 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 ANKRD34BA5PLL1 514 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 NUAK1O60285 661 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 ANXA6P08133 673 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 FMO3P31513 532 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 NFKB2Q00653 900 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 IL5RAQ01344 420 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 NDUFA5Q16718 116 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 AAK1Q2M2I8 961 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 BEND5Q7L4P6 421 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 P2RY8Q86VZ1 359 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 MMAAQ8IVH4 418 aaKnown RBP20.05■□□□□ 0.8
SHOX2-203ENST00000441443 POC5Q8NA72 575 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 EMID1Q96A84 441 aaPredicted RBP20.05■□□□□ 0.8
SHOX2-203ENST00000441443 ZNF486Q96H40 463 aaPredicted RBP20.05■□□□□ 0.8
SHOX2-203ENST00000441443 PRKD2Q9BZL6 878 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 FBXO10Q9UK96 956 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 KCTD3Q9Y597 815 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 PIRO00625 290 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 TBX1O43435 398 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 MAFKO60675 156 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 TULP3O75386 442 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 S1PR4O95977 384 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 PTPN2P17706 415 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 CCNCP24863 283 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 YWHAHQ04917 246 aaPredicted RBP20.05■□□□□ 0.8
SHOX2-203ENST00000441443 HID1Q8IV36 788 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 ARHGAP12Q8IWW6 846 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 ARRDC4Q8NCT1 418 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 FEM1AQ9BSK4 669 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 SLC39A8Q9C0K1 460 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 NCF1BA6NI72 391 aaPredicted RBP20.05■□□□□ 0.8
SHOX2-203ENST00000441443 RRN3P2A6NIE6 340 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 NCF1CA8MVU1 366 aaPredicted RBP20.05■□□□□ 0.8
SHOX2-203ENST00000441443 KCNK2O95069 426 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 WISP3O95389 354 aaPredicted RBP20.05■□□□□ 0.8
SHOX2-203ENST00000441443 CHEK2O96017 543 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 CTSHP09668 335 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 NCF1P14598 390 aaPredicted RBP20.05■□□□□ 0.8
SHOX2-203ENST00000441443 PPP2R2BQ00005 443 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 GRB14Q14449 540 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 MFSD10Q14728 455 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 ATP6V0D2Q8N8Y2 350 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 RHNO1Q9BSD3 238 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 DSN1Q9H410 356 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 ITM2CQ9NQX7 267 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 TMEM30AQ9NV96 361 aa20.05■□□□□ 0.8
SHOX2-203ENST00000441443 INTS6Q9UL03 887 aaKnown RBP20.05■□□□□ 0.8
SHOX2-203ENST00000441443 KRT75O95678 551 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 GOT2P00505 430 aaKnown RBP20.04■□□□□ 0.8
SHOX2-203ENST00000441443 SPNP16150 400 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 KIAA0319Q5VV43 1072 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 TMEM179BQ7Z7N9 219 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 LYSMD2Q8IV50 215 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 OR2T11Q8NH01 316 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 RHOXF1Q8NHV9 184 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 ESAMQ96AP7 390 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 ASPSCR1Q9BZE9 553 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 MARCH7Q9H992 704 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 FLRT1Q9NZU1 646 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 LIMD1Q9UGP4 676 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 TSC2P49815 1807 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 SUPT3HB4E1H0 165 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 ASNA1O43681 348 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 MGEA5O60502 916 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 CELF2O95319 508 aaKnown RBP20.04■□□□□ 0.8
SHOX2-203ENST00000441443 PPP5CP53041 499 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 MAXP61244 160 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 SAPCD2Q86UD0 394 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 KCTD13Q8WZ19 329 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 ISG20Q96AZ6 181 aaKnown RBP20.04■□□□□ 0.8
SHOX2-203ENST00000441443 ASB2Q96Q27 587 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 TRIT1Q9H3H1 467 aaKnown RBP20.04■□□□□ 0.8
SHOX2-203ENST00000441443 NECTIN3Q9NQS3 549 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 COMMD8Q9NX08 183 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 TMA7Q9Y2S6 64 aaKnown RBP20.04■□□□□ 0.8
SHOX2-203ENST00000441443 DERAQ9Y315 318 aa20.04■□□□□ 0.8
SHOX2-203ENST00000441443 TYW5A2RUC4 315 aaKnown RBP20.03■□□□□ 0.8
SHOX2-203ENST00000441443 GLTPD2A6NH11 291 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 RFPL2O75678 378 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 PARNO95453 639 aaKnown RBP20.03■□□□□ 0.8
SHOX2-203ENST00000441443 HPRP00739 348 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 FTH1P02794 183 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 COPZ1P61923 177 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 CDK5R2Q13319 367 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 TXNDC15Q96J42 360 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 PLXNA1Q9UIW2 1896 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 SNX2O60749 519 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 CD6P30203 668 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 EIF2DP41214 584 aaKnown RBP20.03■□□□□ 0.8
SHOX2-203ENST00000441443 TAF6P49848 677 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 AFF1P51825 1210 aaKnown RBP20.03■□□□□ 0.8
SHOX2-203ENST00000441443 RAPSNQ13702 412 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 PTPRCAPQ14761 206 aa20.03■□□□□ 0.8
SHOX2-203ENST00000441443 WSCD1Q658N2 575 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms