RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 ROR2Q01974 943 aaKnown RBP6.33□□□□□ -1.4
CNOT1-202ENST00000441024 FOXM1Q08050 763 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 CCNYL2Q5T2Q4 361 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 NEK10Q6ZWH5 1172 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 CHPFQ8IZ52 775 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 LRRC15Q8TF66 581 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 SEC14L1Q92503 715 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 APOLD1Q96LR9 279 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 C1orf74Q96LT6 269 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 RAB11FIP5Q9BXF6 653 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 DGCR6LQ9BY27 220 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 USP29Q9HBJ7 922 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 POPDC3Q9HBV1 291 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 CCDC177Q9NQR7 707 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-202ENST00000441024 CALML5Q9NZT1 146 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 GULP1Q9UBP9 304 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 FBXL21Q9UKT6 434 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 PCDHGA11Q9Y5H2 935 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 SNX10Q9Y5X0 201 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 HEBP2Q9Y5Z4 205 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 TLL2Q9Y6L7 1015 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 AQP12BA6NM10 295 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 PLK4O00444 970 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 OR10H2O60403 315 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 MFN2O95140 757 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 FABP3P05413 133 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 HLA-DQB2P05538 268 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 SRPRAP08240 638 aaKnown RBP6.33□□□□□ -1.4
CNOT1-202ENST00000441024 HNMTP50135 292 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 OGDHQ02218 1023 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 ZNF846Q147U1 533 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 TEAD4Q15561 434 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 ALFQ53S48 1182 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 ZNF618Q5T7W0 954 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 CNKSR3Q6P9H4 555 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 RBM44Q6ZP01 1051 aaKnown RBP6.33□□□□□ -1.4
CNOT1-202ENST00000441024 C15orf39Q6ZRI6 1047 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 AQP12AQ8IXF9 295 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 SAMD14Q8IZD0 417 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-202ENST00000441024 KREMEN2Q8NCW0 462 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 DBF4BQ8NFT6 615 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 ENKURQ8TC29 256 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 AP3S1Q92572 193 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 ALG2Q9H553 416 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 AASDHPPTQ9NRN7 309 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 TMEM248Q9NWD8 314 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 DUS2Q9NX74 493 aaKnown RBP6.33□□□□□ -1.4
CNOT1-202ENST00000441024 SMPD3Q9NY59 655 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-202ENST00000441024 FAM53CQ9NYF3 392 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 PACSIN3Q9UKS6 424 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 GTF2A1LQ9UNN4 478 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 PCDHGC4Q9Y5F7 938 aa6.33□□□□□ -1.4
CNOT1-202ENST00000441024 IGKV6D-21A0A0A0MT36 114 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 ABHD14A-ACY1A0A1B0GW23 586 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 OR10H3O60404 316 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 KERAO60938 352 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 SERPINI2O75830 405 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 BMP7P18075 431 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 ITPKAP23677 461 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 CMPK1P30085 196 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 STAT5AP42229 794 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 SSR2P43308 183 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 ATXN1P54253 815 aaKnown RBP6.32□□□□□ -1.4
CNOT1-202ENST00000441024 PTPN5P54829 565 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 GPX6P59796 221 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 ERVK-8P63133 956 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 PTSQ03393 145 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 ATP13A5Q4VNC0 1218 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 IRAK1BP1Q5VVH5 260 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 GDF6Q6KF10 455 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-202ENST00000441024 C11orf88Q6PI97 169 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 CRTC3Q6UUV7 619 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 MAMDC4Q6UXC1 1216 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 TAS1R3Q7RTX0 852 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 FAM220AQ7Z4H9 259 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 DNAJB7Q7Z6W7 309 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-202ENST00000441024 OSTM1Q86WC4 334 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 DENND6AQ8IWF6 608 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 ARL14EPQ8N8R7 260 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-202ENST00000441024 C11orf65Q8NCR3 313 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 OR6K2Q8NGY2 324 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 NPLOC4Q8TAT6 608 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 HM13Q8TCT9 377 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 AZIN2Q96A70 460 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 PCYT2Q99447 389 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 GPR22Q99680 433 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 KIFC1Q9BW19 673 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 SLC29A3Q9BZD2 475 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 C1orf21Q9H246 121 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 TRMT13Q9NUP7 481 aaKnown RBP6.32□□□□□ -1.4
CNOT1-202ENST00000441024 POLR3BQ9NW08 1133 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-202ENST00000441024 ZDHHC3Q9NYG2 299 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 EGFL7Q9UHF1 273 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 ADAMTSL1Q8N6G6 1762 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 CCDC162PA2VCL2 907 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 SCAMP3O14828 347 aaKnown RBP6.32□□□□□ -1.4
CNOT1-202ENST00000441024 PIP5K1BO14986 540 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 TIPRLO75663 272 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 CFHP08603 1231 aa6.32□□□□□ -1.4
CNOT1-202ENST00000441024 ANXA4P09525 319 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms