RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 PCDHB3Q9Y5E6 796 aa18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 MITFO75030 526 aaPredicted RBP18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 CPT1AP50416 773 aa18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 OCA2Q04671 838 aa18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 FAM98BQ52LJ0 330 aaKnown RBP18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 BROXQ5VW32 411 aa18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 LETMD1Q6P1Q0 360 aa18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 ARRDC2Q8TBH0 407 aa18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 PNPT1Q8TCS8 783 aaKnown RBP18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 L3HYPDHQ96EM0 354 aa18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 CINPQ9BW66 212 aaPredicted RBP18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 LATS2Q9NRM7 1088 aa18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 SMPD4Q9NXE4 827 aa18.05■□□□□ 0.48
PTPRJ-202ENST00000440289 TBC1D4O60343 1298 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 PRKD3O94806 890 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 CHRNA1P02708 482 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 GPIP06744 558 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 STC1P52823 247 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 ZNF555Q8NEP9 628 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 FUBP1Q96AE4 644 aaKnown RBP18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 ZUFSPQ96AP4 578 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 TDRD1Q9BXT4 1180 aaKnown RBP18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 TM6SF2Q9BZW4 377 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 FUOMA2VDF0 154 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 KRT87PA6NCN2 255 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 MYCLP1P12525 358 aaPredicted RBP18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 HSD17B1P14061 328 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 ERVPABLB-1P60509 514 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 TIAL1Q01085 375 aaKnown RBP eCLIP18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 SPCS2Q15005 226 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 RGS21Q2M5E4 152 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 XKR4Q5GH76 650 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 PAGE2BQ5JRK9 111 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 TMEM236Q5W0B7 351 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 DET1Q7L5Y6 550 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 PHYKPLQ8IUZ5 450 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 CROCCP3Q8IVE0 287 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 TANKQ92844 425 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 BIRC8Q96P09 236 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 SYTL2Q9HCH5 934 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 AMBNQ9NP70 447 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 VAPAQ9P0L0 249 aa18.04■□□□□ 0.48
PTPRJ-202ENST00000440289 STX7O15400 261 aaKnown RBP18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 CACNG3O60359 315 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 VPS26AO75436 327 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 PEX11BO96011 259 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 FCGR1AP12314 374 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 TGFBR1P36897 503 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 OPRL1P41146 370 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 MAP2K4P45985 399 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 TAF2Q6P1X5 1199 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 MBOAT1Q6ZNC8 495 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 OR2T12Q8NG77 320 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 PROKR1Q8TCW9 393 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 MS4A4AQ96JQ5 239 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 RHNO1Q9BSD3 238 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 RAD21L1Q9H4I0 556 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 CARS2Q9HA77 564 aaKnown RBP18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 B4GALT3O60512 393 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 POLD2P49005 469 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 CASP9P55211 416 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 MSANTD2Q6P1R3 559 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 DCDC5Q6ZRR9 648 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 USP50Q70EL3 339 aaPredicted RBP18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 TMEM199Q8N511 208 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 MFSD2AQ8NA29 543 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 OR56A4Q8NGH8 313 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 NSUN3Q9H649 340 aaKnown RBP18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 RANBP2P49792 3224 aaKnown RBP18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 CDH3P22223 829 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 TMED10P49755 219 aaKnown RBP18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 PLA2G16P53816 162 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 KCNAB2Q13303 367 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 CPSF6Q16630 551 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 ZNF829Q3KNS6 432 aaPredicted RBP18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 LIMS2Q7Z4I7 341 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 UHRF1Q96T88 793 aaPredicted RBP18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 HCSTQ9UBK5 93 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 GMEB1Q9Y692 573 aa18.03■□□□□ 0.48
PTPRJ-202ENST00000440289 TRIM43BA6NCK2 446 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 HK3P52790 923 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 IL2P60568 153 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 ABRAXAS2Q15018 415 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 LDLRAD1Q5T700 205 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 ARMC12Q5T9G4 340 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 CYP20A1Q6UW02 462 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 TRIM54Q9BYV2 358 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 IKZF5Q9H5V7 419 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 CSNK1G1Q9HCP0 422 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 RIC8BQ9NVN3 520 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 INTS10Q9NVR2 710 aaKnown RBP18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 AIG1Q9NVV5 245 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 ABCD2Q9UBJ2 740 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 PKP3Q9Y446 797 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 TRPV2Q9Y5S1 764 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 M0R3G1 203 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 AXIN1O15169 862 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 KDM1AO60341 852 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 NBNO60934 754 aa18.02■□□□□ 0.48
PTPRJ-202ENST00000440289 KERAO60938 352 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms